KEGG   Sagittula sp. P11: CDO87_23900
Entry
CDO87_23900       CDS       T05219                                 
Name
(GenBank) endonuclease
  KO
K18434  type IV secretion system T-DNA border endonuclease VirD2
Organism
sagu  Sagittula sp. P11
Brite
KEGG Orthology (KO) [BR:sagu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sagu02044]
    CDO87_23900
Secretion system [BR:sagu02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   CDO87_23900
SSDB
Motif
Pfam: Relaxase GETHR TBCC_N
Other DBs
NCBI-ProteinID: AUC56333
LinkDB
Position
unnamed2:57774..60101
AA seq 775 aa
MRLNDAVHDVTGEIFRDGWSRIRGSMQGLQASRQRQLVRAAAGHRAAVFKAIRGGGTHSK
SQLMNQLDYLTTKSSHIVDSSGFLDGKTRLEGSEIKDLTERFAKRWSAGFKPKLGQTTHM
LMSYPIGTRGEDVRDITANVAERFFQSEEGHFDYIIAVHEDRDHPHAHIVLNRRSQEGEF
FFLGRDHRFNYDDFRLAMVEEAERFGVRLEATRRLDRGVVHYPPRTREVYAAKVEGRAAE
PRPRVGADLDRALEEIANTRIIYHSLAAEASADNREDIADALFRSGELLAKGGKLTLEGG
VYMAEEQSFEDLRTRYADQVARVQGMIDAKPEAERPRLERSLNEIQSRLAHMQPLGLRSV
TLTEKPSEGGVYSETNIDAARLDRLRDPEVRAQVDTALRGTGISSSVVVARMETGAQNAA
LERQWIADDLARVAERDGLNLERRADLETARETLNRAHVQLGVALERAGVLREDGVVEDR
TVTERVHYHRDATEDMERAIRQDMRSEGLTEDQIEAREWEIVSRAERRIEEEQRSYLDAH
PELLARPGDVIDRSEPYRERITDEARAREITREVDRIMEGRDARTPVADAVTDEFRARYP
DMPSHLARGLGATYASVTDLRDTEALNQVRRDNELREVALDLRDGRLSDAREGDAVEGAP
IADPDIRRVVDHERAGNLQSPFQDDGQRLTYRDAVERELDAAQIDRLRDGDVDVLKTQIE
DRLDRLYAAKTYLQSDAATANSEATRAVVEEIADREFELHRADLVDGETERGETH
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgcggctgaatgatgccgtccatgacgtcaccggagagatcttccgggatggctggagc
cggatacggggctcgatgcaagggctgcaggcgtcccggcagaggcagctcgtgcgcgcc
gctgcggggcatcgtgcggcggtcttcaaggcgatccggggcgggggcacgcattccaaa
tcccagctcatgaaccagcttgattacctcaccaccaagtcctcgcatatcgtggacagc
agcgggttcctggatgggaagacgaggcttgagggatcggagatcaaggacctgacggag
cggttcgccaagcgctggagtgcggggttcaagcccaagctcggacagacgacgcatatg
ctgatgtcctatccgatcggcacccggggcgaggacgtgcgcgacatcaccgccaatgtc
gccgagcggttctttcagtccgaagagggacatttcgactacatcatcgcggtgcatgag
gatcgcgatcacccccacgcacatatagttttgaatcgccggtcgcaggagggtgagttc
ttcttcctgggtcgcgatcaccggttcaactacgacgatttccgcctcgccatggtggaa
gaggccgagcggttcggcgtgcgtctggaggccacgcggcggctcgatcggggtgtcgtg
cactacccgccgcgcacccgcgaggtctatgcggccaaggttgaggggcgggccgcggag
ccacggccacgggtcggggccgatcttgatcgcgccctcgaagagatcgcaaacacccgg
atcatctatcactcgcttgccgctgaggcctctgcggacaaccgcgaggacatcgccgat
gccctgttccgctcgggagagcttctggccaagggcggcaagctgactttggaaggaggc
gtctacatggcagaggagcaatcgttcgaggatctgaggacccgttatgccgatcaggtc
gcgcgcgtccagggcatgatcgatgcgaagccggaggccgaacggccgcggctcgagcgc
agcctcaacgagatccagtcgcggctcgcgcatatgcagccgctagggctcagatccgtg
acattgaccgaaaagccctcggagggcggggtctattccgagaccaatatcgatgcggcc
cggctcgaccggttgcgagaccccgaggtgcgggcgcaggtcgacaccgcgctgcgcggg
accgggatcagttcgtccgtggtggtcgcccggatggaaaccggcgcgcagaacgccgcg
ctcgagcggcaatggatcgctgacgatctggcgcgggtggccgagagggacggtctcaac
ctcgagcgccgcgcggatctggagacggcgcgcgagaccctcaaccgggcccatgtccag
ctcggcgtcgcgctggagcgggcaggggtcttgcgtgaggacggtgtcgtggaagatcgc
accgtgacggagagggtccattatcatcgggacgccactgaggacatggagcgcgccatc
cgccaggacatgcgttcggaaggtctgaccgaagaccagatcgaggcgcgggagtgggag
atcgtctcccgcgcggagcggcgtatcgaagaagagcaacgcagctacctcgatgcgcat
cccgaactgctcgcgcgcccgggcgacgtgatcgaccggtccgagccctaccgggagcgc
atcaccgacgaggcccgggcccgcgagatcacccgcgaagtcgaccggatcatggaaggt
cgcgacgcgcggacccccgttgcggatgccgtcacggacgagttccgcgcgcgctatccc
gatatgccgtcgcatctcgcccgcgggcttggcgcgacctatgcttccgtcaccgatctg
cgcgacaccgaggccctcaaccaggtccgccgcgacaacgagttgcgggaggtggcgctc
gacctgcgcgacgggcggctttcggacgcgcgcgagggggacgctgtcgagggggcaccg
atcgccgatccggacatccggcgggtcgtcgaccatgaacgggccggcaatctgcagtcg
ccgttccaggacgacggtcagcgactgacctaccgcgacgccgtcgagcgcgagctcgac
gcggcgcagatcgaccggctgcgggacggggatgtcgacgtgctgaagacccagatcgaa
gaccgtctcgatcggctctacgccgcgaagacctacctgcagtcggacgcggccaccgcc
aacagcgaggcgacccgcgccgtggtcgaggagatcgccgaccgcgagttcgagctccac
cgcgccgatcttgtcgatggcgagaccgagcgcggggagacgcactga

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