Sagittula sp. P11: CDO87_25690
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Entry
CDO87_25690 CDS
T05219
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sagu
Sagittula sp. P11
Pathway
sagu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDO87_25690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sagu02000
]
CDO87_25690
Transporters [BR:
sagu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CDO87_25690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AUC56670
LinkDB
All DBs
Position
unnamed4:complement(11268..12800)
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AA seq
510 aa
AA seq
DB search
MIRNRTGLVSACLIAAAPLLAGTALADKSDDTMRVAFTEDIINLDYNFTTKREYIIISEL
IDETLLAINPSDGSYAPALASDYTQVDPVTLDVTLREGILFHDGTEMTAEDVAYTYNTVA
SGESQSLSGARIEVWFDRAEVLEPYKVRFHFKQQYPLALQDMAIRVPIRKAGTYGTDGTI
DVNAASGGPVGLGPYKVTSFEPGDELVLERFAEYYDGSPKGDPSIGTIVIRSLPDEGTQQ
AELISGSIDWIYDVPRDVAENLGNMPQVKHLSGPDRRIGFLILDAGGLAEPDGPLTDLKV
RRAVAHAIDREEIAAALIGGAAAAIDGARHPSELGCNQQVTTYEYDPEKARQLLAEAGYE
DGFEMELWGYRDKPMGEAIVADLNEVGIDATLRQVKLDSLNVARANRQISSYFGTWGGDT
APPIRQHFDPDSDRNLSGDAELAQMVTDAYVSLDADEQSDLFAKIHARITDQVYWVPLWS
YSVNYLTDPDLDFPTDDDGFPRLYKASWGE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgatacgaaataggaccgggcttgtttcggcctgtctgattgctgcggccccgctgctg
gcgggcacggcccttgcggacaagtcggacgacaccatgcgtgtcgccttcaccgaggac
atcatcaacctcgactacaacttcacgacgaagcgcgagtacatcatcatctcggaactg
atcgacgagacgcttctcgcgatcaatccctccgacggcagctacgcgcccgcgctggcg
tccgattacacgcaggtcgatccggtgacgctggacgtcacgctgcgcgagggcatcctg
ttccacgacggcaccgaaatgaccgccgaggacgtcgcctacacctacaacacggtggcc
tccggggagtcgcagagcctgtccggcgcgcggatcgaggtctggttcgaccgcgccgag
gtgctggagccctacaaggtccggttccatttcaagcagcagtatccgctggccctgcag
gacatggcgatccgggtgccgatccgcaaagccggcacatacgggaccgatggcaccatc
gacgtgaacgcggcgtcgggcgggccggtggggcttgggccctacaaggtcacgtccttc
gaaccgggcgacgaactcgtgctcgaacgcttcgcggaatactacgatggcagcccgaag
ggcgatccctccatcgggaccatcgtcatccgttcgctgcccgacgaagggacccagcag
gcggaactgatctcgggcagcatcgactggatctacgacgtgccgcgcgacgtggccgag
aacctcggcaacatgccgcaggtcaagcacctgtcgggtcccgaccggcgcatcggtttc
ctgatcctcgatgccggcgggctggccgaaccggacgggccgctgaccgacctcaaggtc
cgccgcgccgtggcccatgccatcgaccgcgaggagatcgccgcagccctgatcggcggc
gcggcggccgccatcgacggcgcccgccacccctcggaactcggctgcaaccagcaggtg
acgacctacgaatacgatcccgaaaaggcgcgtcagttgctggcggaggccgggtatgaa
gacgggttcgagatggagctttggggttatcgcgacaagcccatgggcgaagccatcgtc
gcggacctgaacgaggtgggtatcgacgccacgctgcggcaggtcaagctggacagcctc
aacgtggcccgcgccaaccggcagatctcgtcgtacttcgggacatggggcggggacacg
gcgccgccgatccggcagcacttcgacccggatagcgaccgcaacctgtccggcgacgcc
gaactcgcgcagatggtgacggacgcctacgtttcgctggacgcggacgagcagtccgac
ctcttcgccaagatccacgcgcggatcaccgaccaggtgtactgggtgccgctgtggtcg
tactcggtgaactacctgaccgacccggatctggactttccgacggacgacgacgggttc
ccgcggctctacaaggcctcctggggcgagtga
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