Sagittula sp. P11: CDO87_26150
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Entry
CDO87_26150 CDS
T05219
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu00521
Streptomycin biosynthesis
sagu00541
Biosynthesis of various nucleotide sugars
sagu01100
Metabolic pathways
sagu01110
Biosynthesis of secondary metabolites
sagu01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CDO87_26150 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CDO87_26150 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CDO87_26150 (rfbC)
Enzymes [BR:
sagu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CDO87_26150 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AUC56757
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All DBs
Position
unnamed6:complement(5756..6328)
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AA seq
190 aa
AA seq
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MTEFKDTPLPGLREITPRRFGDHRGFFSESYSAKVFAENGIDTVFVQDNHSLSAAVGTVR
GLHFQSPPHAQAKLVRCGRGSIFDVAVDIRKGSPTYGQWYGTELSFENGRQLLVPAGFLH
GFMTLQPDSEIVYKCSDFYAPECDGGVRWNDPGIGITWPETGAAPVLSDKDAAAPLLADF
DSPFTWEDAA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattcaaggacacgcccctgcccggcctccgggagatcacgccccgccggttc
ggcgatcatcgcggcttcttcagcgagagctacagcgccaaggtcttcgccgaaaacggc
atcgacacggtcttcgtgcaggacaaccattcgttgtccgcggcggtgggcacggtgcgc
ggccttcacttccagtcgccgccccatgcccaggccaagctggtgcgctgcgggcggggt
tcgatcttcgacgtggcggtcgacatccgcaagggcagcccgacctacggccagtggtac
ggcaccgaactcagcttcgagaacggccgccagctcctggtgcccgcgggcttcctgcac
ggcttcatgacgctccagcccgacagcgagatcgtctacaagtgctcggacttctatgcg
cccgagtgcgacggcggcgtgcgctggaacgatcccggcatcggaatcacctggcccgag
accggcgccgcgccggtgctgtcggacaaggacgccgcggccccgctgctggcggacttc
gacagccccttcacctgggaggacgcggcatga
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