Sagittula sp. MA-2: QNI11_02810
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Entry
QNI11_02810 CDS
T11138
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sagz Sagittula sp. MA-2
Brite
KEGG Orthology (KO) [BR:
sagz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagz03032
]
QNI11_02810 (ihfB)
03036 Chromosome and associated proteins [BR:
sagz03036
]
QNI11_02810 (ihfB)
03400 DNA repair and recombination proteins [BR:
sagz03400
]
QNI11_02810 (ihfB)
DNA replication proteins [BR:
sagz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QNI11_02810 (ihfB)
Chromosome and associated proteins [BR:
sagz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QNI11_02810 (ihfB)
DNA repair and recombination proteins [BR:
sagz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QNI11_02810 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WHZ35945
LinkDB
All DBs
Position
538157..538438
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AA seq
93 aa
AA seq
DB search
MIRSELIQKIADENPHLYQRDVERIVNTIFEEITNAMARGDRVELRGFGAFSVKKRDARI
GRNPRTGDSVEVEEKHVPFFKTGKLLRDRLNGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatctgaactgatccagaagattgcggacgagaacccgcatctgtatcagcgt
gacgtagagcggatcgtgaacacgatcttcgaagagatcaccaacgccatggcccggggc
gatcgggtcgagctgcggggcttcggggcgttttcggtcaagaagcgggacgcacggatc
ggtcggaacccccgtacgggagattccgttgaggtcgaagagaaacacgtccccttcttc
aagaccgggaagcttctgcgggaccgcctgaacgggaaataa
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