Sagittula sp. MA-2: QNI11_04240
Help
Entry
QNI11_04240 CDS
T11138
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sagz Sagittula sp. MA-2
Pathway
sagz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNI11_04240 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagz03019
]
QNI11_04240 (pnp)
03016 Transfer RNA biogenesis [BR:
sagz03016
]
QNI11_04240 (pnp)
Enzymes [BR:
sagz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QNI11_04240 (pnp)
Messenger RNA biogenesis [BR:
sagz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QNI11_04240 (pnp)
Transfer RNA biogenesis [BR:
sagz03016
]
Prokaryotic type
tRNA degradation factors
QNI11_04240 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
WHZ36222
LinkDB
All DBs
Position
840482..842623
Genome browser
AA seq
713 aa
AA seq
DB search
MFKEVKKTLQWGEETLTLETGKVARQADGTVIATLGETSVMANVTFAKTQKEGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGAPFMGPIAGARVGYEDGSYVLNPTVDDMHLLRDNPEQR
LDLVVAGTKDAVMMVESEAYELTEDEMLGAVMFAHEQIQPVIDLIIDLAEEAAKEPFDFT
PPDYSALFDVVKAAGEEKMKAAYAISDKQERVAAVAAVKEEIKAGLTEEQLADSNLGSAL
KKLESQVLRSDVVVNKRRIDGRALDQVRSIVSETGILPRTHGSALFTRGETQALVVTTLG
TGDDEQMIDALQGTYKSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLVLEEDGSYG
ILTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMKTALAQAKEGRLHILGE
MSKAISEAGSFSEHAPRIETMNIPTDKIREVIGSGGKVIREIVEMSGAKVDINDDGVIKI
ASPNGDSIQKAYDMIYAIVAEPEEGHIYKGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVYVKLLGFDDRGKVRLAMKMVDQETGEELAKEKEAEQAD
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagaagtgaaaaagacactccagtggggcgaagagacgctgacactggaaacc
ggcaaggttgcgcgccaggcagacggcaccgtgatcgccaccctgggcgaaacgtcggtc
atggccaacgtgacctttgccaagacgcagaaggaagggcaggacttcttcccgctgacc
gtccactaccaggaaaaatactacgccgccggcaagatcccgggcggcttcttcaagcgc
gaggcgcgtccgaccgaaaaggaaacgctgaccgcgcgcctgatcgaccgtccgatccgt
ccgctgttcgtgcccggcttcaagaacgaagtgctggtgatgtgcaccgtgctgagccat
gacctcgtcaacgatcccgacatcgtcgcgatgatcgcggcctccgcggccctgacgatc
tccggcgcgcccttcatgggcccgatcgccggtgcccgcgtgggttacgaggacggctcc
tacgtgctgaacccgaccgtcgacgacatgcacctgctgcgtgacaacccggagcagcgc
ctcgacctcgtggtcgcgggcaccaaggacgccgtcatgatggtggagtccgaggcctac
gaactgaccgaggacgagatgctgggcgccgtgatgttcgcgcacgagcagatccagccg
gtcatcgacctgatcatcgacctggccgaagaagcggcaaaagagccgttcgacttcacc
ccgccggattactcggctctgttcgacgtcgtgaaagcggcgggcgaagagaagatgaag
gccgcctatgcgatctccgacaagcaggagcgcgttgccgctgttgccgccgtcaaggaa
gagatcaaggccggtctgaccgaagaacaactggccgactccaacctcggctcggcgctg
aagaagctggaatcccaggttctgcgttccgacgtggtcgtcaacaagcgccgcatcgac
ggtcgtgcactggaccaggtccgttccatcgtgtcggaaaccggcatcctgccgcggacc
cacggttcggccctgttcacccgtggcgaaacgcaggcgctggtcgtgaccacgctgggc
accggcgacgacgagcagatgatcgacgcgctgcagggtacctacaagtccaacttcctg
ctgcactacaacttcccgccgtactcggtcggtgaagtgggccgcgtgggctccccgggc
cgtcgcgagatcggccacggcaagctggcatggcgcgcgcttcaggcggtgctgccggcg
gcgaccgacttcccctacaccatccgcgtggtgtcggagatcaccgagtccaacgggtcg
tcctccatggcgtccgtctgcggcggctccctgtccatgatggacgcgggcgttccgctg
aaggcgccggtggcaggcgtggccatgggcctcgtgctggaagaggacggctcctacggc
atcctgaccgacatcctgggcgacgaggaccacctcggcgacatggacttcaaggtcgcg
ggcaccgagaacggcatcacctcgctgcagatggacatcaaggtcgcgggcatcaccccc
gagatcatgaagaccgcgctggcacaggccaaggaaggccgcctgcacatcctcggcgaa
atgtcgaaggcgatctccgaggcgggttcgttctctgagcacgcgccgcgcatcgagacg
atgaacatcccgaccgacaagatccgggaagtgatcggctcgggcggcaaggtcatccgc
gagatcgtggaaatgtccggtgccaaggtcgacatcaacgacgacggcgtgatcaagatc
gcatcaccgaacggtgactcgatccagaaggcctacgacatgatctacgcgatcgtcgca
gagccggaagagggccacatctacaagggcaaggttgtgaagatcgtcgatttcggcgcc
ttcgtgaacttcttcggcaagcgtgacggccttgtgcacgtcagccagatcgagaaccgc
cgcctgaaccatccgtcggacgttctgaaggaaggccaggaagtctacgtcaagcttctg
ggcttcgacgaccgcggcaaggtgcgcctcgccatgaagatggtcgatcaggaaaccggt
gaagaactggcgaaggaaaaggaagccgaacaggctgactga
DBGET
integrated database retrieval system
