Sagittula sp. MA-2: QNI11_15620
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Entry
QNI11_15620 CDS
T11138
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sagz Sagittula sp. MA-2
Brite
KEGG Orthology (KO) [BR:
sagz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagz03032
]
QNI11_15620 (topA)
03400 DNA repair and recombination proteins [BR:
sagz03400
]
QNI11_15620 (topA)
Enzymes [BR:
sagz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QNI11_15620 (topA)
DNA replication proteins [BR:
sagz03032
]
Prokaryotic type
DNA Topoisomerases
QNI11_15620 (topA)
DNA repair and recombination proteins [BR:
sagz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QNI11_15620 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WHZ34062
LinkDB
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Position
complement(3205424..3208108)
Genome browser
AA seq
894 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPPKDGSVDTEHDFEMTWEVANDSRK
HVAAIAEALKTDDKLILATDPDREGEAISWHLKEALTKRRSIKKTTEVSRVTFNAITKAA
VTEAMKNPRDIDAPLVEAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVCLRLIVE
REMEIEAFNPREYWQVKAQLATPRGQTFEARLVSLAGKKLDRYDLENATQAEMAVDAVAK
RSLKVLSVEAKPASRNPSAPFMTSTLQQEASRKFGMGAKAAMNAAQRLYEAGHITYMRTD
GIDMAPEAVSACRDAIAERYGKDYVPSSPRVYKNKAKNAQEAHECIRPTDMTKDAESLRL
SESDQRKLYDLIWKRTLACQMEAARLERTTVEIGSDDGQVGLRATGQVVLFDGFLKVYEE
GRDEPVEDDDKRLPQIMQGEPAKFDAGALKSEHAKAMEKGTDRGLPAVLSGDGATLGTQS
FTNPPPRYTEATLVKKMEELGIGRPSTYASVITTIQDREYVRKEQNRLFPEDKGRIVTIF
LLNFFKRYVEYDFTAALEDELDQVSAGAEDYKELLAKFWRDFSAAIAETSDLRISEVLDV
LDEALAPQLYPPREDGSDPRICPKCGQGRLHLKTSRTGGFVGCGNYPECTYTRPIAGEGA
EGEERLLGEDQGDEIWLKAGRFGPYVQRGEPTPENKKPPRASLPKKGGQFLPGWDPADMT
LEKALTLLTMPREVGMHPDGGVVSANLGRFGPYIMHQLPDEEKPVYVNLKEFQEVFEIGM
NHAVELLAQKRANPGRGRQTAKALRDMGEHPDGGKISIMEGRYGPYVKWEKVNATLPKDV
EPADVTMETVLELIAAKAKKKPAKKAAAKSTATKSTTKKTAAKKPAAKKAAKKD
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtcgtcgtcgaatcgcccgccaaggccaagacaatcaacaagtatctggga
tccgactacacggttctggcgtcttacggtcacgtgagggacctgcctccgaaggatggc
tcggtcgatacggaacatgatttcgaaatgacgtgggaggtcgcgaacgattcgcgcaaa
cacgtcgccgccatcgccgaagccctgaaaaccgacgacaagctgatcctcgcaaccgac
cctgatcgtgagggggaggcgatctcgtggcacctgaaggaggcgctgacgaagcgccgt
tcgatcaagaagacgacagaagtcagccgggtcaccttcaacgccatcaccaaggcggcc
gtgaccgaggcgatgaagaacccccgcgacatcgacgcgccgctggtggaggcgtatctc
gcccgccgtgccctcgactacctcgtcggcttcaacctgtcgcctgtgctctggcgcaag
ctgccgggcgcgcggtcggccgggcgggtgcagtccgtctgcctccgcctgatcgtcgag
cgcgagatggagatcgaagcgttcaatccccgcgaatactggcaggtgaaggcacaactc
gcgacgccgcgcggccagacgttcgaggcccggctggtcagcctcgccggcaagaagctc
gaccgctacgacctcgaaaacgccacgcaggccgagatggcggtggatgccgtagccaag
cgcagcctgaaggttctgagcgtcgaggcgaagcctgcttcgcgcaacccttcggcgccg
ttcatgacctccaccctccagcaggaggcgagccgcaagttcggcatgggcgccaaggcg
gcgatgaacgcggcccagcggctctacgaggccgggcacatcacttatatgcggacggac
ggcatcgacatggcgccggaagccgtcagcgcctgccgcgacgccatcgcggagcgctac
ggcaaggattacgtgccgtcctcgcctcgggtctacaagaacaaggcgaagaacgcgcag
gaagcgcacgagtgcatccgtccgaccgacatgacgaaggacgccgagagcctgcgcctg
tccgaatccgaccagcgcaagctgtatgacctgatctggaagcgcacgctcgcctgccag
atggaggccgcccggctggagcggaccacggtcgagatcggctccgacgacgggcaggtc
ggtctgcgcgccaccggccaggtggtgctcttcgacgggttcctgaaggtctacgaggaa
ggccgcgacgagccggtcgaggatgacgacaagcgcctgccgcagatcatgcagggcgag
ccggcgaagttcgacgcgggcgcgctcaagtccgagcatgcgaaggcgatggagaagggc
accgaccgtggtctgcccgcggtgctgtccggcgacggcgcgacgcttggcacgcagagc
ttcaccaacccgccgccgcgctacaccgaggcgacgctggtcaagaagatggaggaactc
ggcatcgggcgaccctccacctatgcttccgtcatcacgacgatccaggaccgcgaatat
gtccgcaaggaacagaaccgtctgttcccggaggacaagggccggatcgtgacgatcttt
ctgctgaacttcttcaagcgctacgtggagtacgacttcaccgccgcgctggaggacgag
ctggaccaggtcagcgcaggtgccgaggactacaaggaactgctggcgaagttctggcgc
gacttcagcgcggccatcgccgagacgtccgacctgcgtatctcggaggttctggatgtg
ctggacgaggcgcttgcgccccagctttacccgccgcgtgaggacgggagcgatccgcgc
atctgtccgaagtgcgggcaggggcggctgcacctgaagacctcgcgcaccggcggcttc
gtcggctgcggcaactaccccgaatgcacctacacgcgccccatcgcgggcgagggtgca
gaaggcgaggaacgtctgctgggcgaggatcagggtgacgagatctggctgaaggccggg
cgcttcggcccctacgtgcagcgcggcgaacccacgccggagaacaagaaaccgccgcgt
gcctctctgccaaagaagggcggccagttcctgccgggctgggacccggcggacatgacg
ctggaaaaggcgctcacgctgctgaccatgccgcgcgaagtggggatgcaccccgatggc
ggcgtcgtcagcgcgaacctcgggcgcttcggtccctacatcatgcaccaactcccggac
gaggagaaaccggtctacgtgaacctcaaggagttccaggaggtcttcgagatcgggatg
aaccacgccgtcgaactgctggcgcagaagcgggcgaaccccggtcgcgggcgacagacg
gccaaggcgctgcgcgacatgggcgagcatcccgatggcggcaagatctccatcatggag
ggccgctacggtccctatgtaaagtgggagaaggtcaatgccacgctgccgaaggacgtg
gagcctgcggacgtgacaatggaaaccgtgctggaactgatcgccgcgaaggcgaagaag
aaaccggcgaagaaggccgcggccaaatcgaccgccacaaagtcgaccacgaagaagacc
gccgcaaagaagccggcggccaagaaggcggcgaagaaagactga
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