Sagittula sp. MA-2: QNI11_17830
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Entry
QNI11_17830 CDS
T11138
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sagz Sagittula sp. MA-2
Pathway
sagz03030
DNA replication
sagz03430
Mismatch repair
sagz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sagz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QNI11_17830 (dnaE)
03430 Mismatch repair
QNI11_17830 (dnaE)
03440 Homologous recombination
QNI11_17830 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagz03032
]
QNI11_17830 (dnaE)
03400 DNA repair and recombination proteins [BR:
sagz03400
]
QNI11_17830 (dnaE)
Enzymes [BR:
sagz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QNI11_17830 (dnaE)
DNA replication proteins [BR:
sagz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QNI11_17830 (dnaE)
DNA repair and recombination proteins [BR:
sagz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QNI11_17830 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WHZ34482
LinkDB
All DBs
Position
complement(3652062..3655562)
Genome browser
AA seq
1166 aa
AA seq
DB search
MADPRFIHLRTHTEYSLLEGALRLKKLPGMCADMGMPAVAVTDTNNLFAALEFSVGAAGA
GVQPIIGCQIDLRYFEHAPGERIRPPAPVVLLAQTERGYEHLMKLNSCLYLRRDNELAHV
TLDELEAHSEDVICLSGGPDGPVGRLLRTNSRAAAQTLMTRLHSIFEDRLYVELQRHPGE
DGTPPEAEQLTERGFVEMAYEMGLPLVATNDVYFPKSTMYEAHDAMICIAEGAYVDQQEP
RRRLTPQHYLKTPQEMAVLFADLPEALENTVEIAKRCAFMAYRRDPILPRFADDEVTELR
RMANEGLQARLAVIPHAVPVEEYQKRLDFELGIIEGMGFPGYFLIVADFIQWAKDQDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIQYV
QQKYGHDRVAQIITFGALLSKAAVRDMGRVLQMPYGQVDRLSKMIPVEGVKPVSIEQALR
DEPRLAEEARNEEVVDRLLKYGMQVEGLLRSAGTHAAGVVIADRPTDELVPLYRDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAMDLIFKSGRPLHVAADGTQLYEPPEGAE
NQINLIPLDDKVTYKLYASAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGLREITSVHPSIDHILAETQGIIVYQEQVMQIAQEMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFEQGAAKNGVEKKKATEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVRKGLGLPWVPPCVNRSLATFDVVEGQ
LVYALGALKNVGLEAMKLVVEGRDGRPFSTVFDFARRVDLKKIGKRPLEMMARAGCFDVL
DPNRRRLFDSLDALVAYSAAIHEQKSSAQVSLFGEAGDDLPEPRLSPVSDWLPAERLAEE
FKAVGFYLSGHPLDDYMPALKRQDVVTLDEVMAKAERGPLVAKLAGVVAGRQERKSARGN
RFAFAQLSDPTGAYEVTLFSETLEKSREHLETGSKVVVTVEATMESDQLKLLGRAVMPVD
AAAAQGGPSGMRIFVDTEMALSQIASVLGRAAEQLPKAPRAPIVLRLAAPGLPGEVEMDL
SERFPVTPEIKGAVKSLDGVLAVEDF
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccgcgattcattcacctccgcacccacaccgaatattccctgctcgaaggc
gcgctccggctgaagaagctgccgggcatgtgcgccgacatggggatgcccgccgtggcg
gtcaccgacaccaacaacctgttcgccgcgctggaattttccgtgggcgccgccggggcg
ggcgtgcagccgatcatcggctgccagatcgacctgcgctatttcgagcacgccccgggc
gagcggatcaggccgccggcgccggtggtgctgctggcccagacggagcgcggctacgag
catctgatgaagctcaattcctgcctgtacctgcgccgcgacaacgagctggcgcatgtg
acgctggacgagctggaggcgcattcggaggatgtgatctgcctgtcgggcgggccggac
gggccggtggggcggcttctgcgcaccaattcgcgggcggcggcgcagacgctgatgacc
cggctgcattcgatcttcgaagaccggctgtacgtcgagctgcagcgccaccccggcgag
gacggcacgccgccggaggcggagcaactgacggagcgcggctttgtcgagatggcctac
gagatgggcctgccgctggtcgcgacgaacgacgtctatttcccgaagtccaccatgtac
gaggcgcatgacgcgatgatctgcatcgcggagggcgcctatgtcgaccagcaggagccg
cgccgccgcctgacgccgcagcattacctgaagaccccgcaggagatggcggtgctgttc
gccgacctgccggaggcgctggaaaacaccgtcgagatcgcgaagcgctgtgccttcatg
gcctatcgccgcgacccgatcctgccgcgctttgccgacgacgaggtgacggaactgcgg
cgcatggccaacgaggggctgcaggcgcgtctggccgtgatcccgcatgccgtgccggtg
gaggaataccagaagcggctcgacttcgagctggggatcatcgaggggatgggtttcccc
ggctacttcctgatcgttgcggacttcatccagtgggccaaggaccaggatatcccggtc
gggccggggcgggggtcgggcgcggggtcgctggtggcctacgcgctgacgatcaccgac
ctcgacccgctgcgctattcgctgctgttcgaacgcttcctgaacccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgcatggatcgccgcgaggaggtgatccagtacgtg
cagcagaaatacggacacgaccgggtggcgcagatcatcaccttcggcgcgctcctgtcg
aaggcggcggtgcgcgacatgggccgggtcctgcagatgccctacgggcaggtggaccgc
ctgtcgaagatgatcccggtggagggggtgaagcccgtctccatcgagcaggcgctgcgg
gacgagccgcggctggccgaggaggcgcggaacgaggaggtcgtcgaccggctgctgaag
tacgggatgcaggtggaggggctgctgcgcagcgccggcacgcacgcggcgggggtggtc
atcgccgaccgccccacggacgagctggtgccgctctaccgcgacccgcgctccgacatg
ccggcgacgcagttcaacatgaagtgggtggagcaggccggtctggtgaagttcgacttc
ctcggcctgaagacgctgacggtgatccagaacgccatggacctgatcttcaagtccggg
cgcccgctgcatgtcgccgctgacggcacgcagctttacgagccgccggagggggcggag
aaccagatcaaccttatcccgctggacgacaaggtcacctacaagctctatgcctcggcc
aagacggtggcggtgttccaggtggaaagctcgggcatgatggatgcgctgaagcgtatg
aagcccacctgcatcgaggacatcgtggcgcttgtggcgctgtaccgccccggcccgatg
gagaacatcccggtctattgcgaggtcaagaacggcctgcgcgagatcacgtccgtccat
ccgtccatcgaccacatcctggccgagacgcagggcatcatcgtttaccaggaacaggtg
atgcagatcgcgcaggagatggcgggctactcgctcggcggcgccgacctgctgcgccgc
gcgatgggcaagaagatcaaggaggcgatggacgccgaacggcccaagttcgaacagggc
gcggcgaagaacggggtggagaagaagaaggccaccgaggtcttcgaccttctggagaag
ttcgccaactacggcttcaacaagtcgcacgcggcggcctacgcggtggtcagctaccag
accgcgtggctcaaggcgaaccacccggtggagttcatggcgggcgtcatgaactgcgat
atccacctgactgacaagctggccgtctatttcgaggaggtccgcaaggggctgggcctg
ccgtgggtgccgccctgcgtgaaccgctcgctcgcgacgttcgacgtggtggaggggcag
ctggtctatgccctgggcgcactgaagaacgtgggcctcgaggcgatgaagctggtggtg
gaggggcgtgacgggcggccgttctcgaccgtcttcgactttgcccgccgcgtggacctg
aagaagatcggcaagcggcctctggagatgatggcgcgggcgggctgtttcgacgtgctc
gacccgaaccgccggcggctgttcgattcgctcgacgcgctggtggcctattcggcggcg
atccacgagcagaagagctccgcccaggtgtcgctgttcggcgaggcaggcgacgacctg
ccggaaccgcgcctgtcgccggtgtccgactggctgcccgccgaacggctggcggaggag
ttcaaggcggtgggcttctacctgtccggtcacccgctcgacgattacatgcccgcgctg
aagcggcaggacgtggtgacgctggacgaggtcatggccaaggccgagcgcggcccgctg
gtggccaagctggcgggcgtcgtcgccggacggcaggaacgcaagtcggcgcgcggcaac
cgttttgcctttgcgcagctgtcggacccgaccggagcctacgaggtcacgctgttctcc
gagacgctggagaagtcgcgcgaacacctcgagaccggatcgaaggtcgtcgtcaccgtc
gaggcaacgatggagagcgaccagctgaaactgctgggccgcgcggtgatgccggtggat
gcggcggcggcgcagggcggaccttcggggatgcggatcttcgtcgacacggagatggcg
ctgagccagatcgccagcgtgctgggccgcgccgccgagcagttgccgaaggcgccgcgc
gcgccgatcgtgctgcggctggcggcgccgggcctgccgggcgaggtggagatggacctt
tccgaacgcttccccgtcacgccggagatcaagggcgcggtgaagtcgctcgacggggtg
ctggcggtcgaggacttctga
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