Sagittula sp. MA-2: QNI11_18175
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Entry
QNI11_18175 CDS
T11138
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sagz Sagittula sp. MA-2
Pathway
sagz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNI11_18175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sagz03019
]
QNI11_18175
03009 Ribosome biogenesis [BR:
sagz03009
]
QNI11_18175
Enzymes [BR:
sagz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QNI11_18175
Messenger RNA biogenesis [BR:
sagz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QNI11_18175
Ribosome biogenesis [BR:
sagz03009
]
Prokaryotic type
rRNA helicases
QNI11_18175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WHZ34549
LinkDB
All DBs
Position
3723887..3726106
Genome browser
AA seq
739 aa
AA seq
DB search
MIPALTDALTERGYDTLTPVQEAVTAPDADGRDLLVSAQTGSGKTVGFGLAIAPTLLGED
QAFGPAGTPLALVVAPTRELAFQVMQELRWLYEKTGAMVNSCVGGMDVRQERRFLERGTH
IVVGTPGRLCDHIRRGALDLSDVRAVVLDEADEMLDLGFREDLEFILQTAPAERRTLLFS
ATVSPVIGRIAEEFQKDAFRINTINKAKQHADIAYKALRVAQADSDHAIFNLLRFHDDES
AIVFANTRAQVNHLTARLHNRGLSVVSLSGELSQQERTHALQAMRDGRARVCVATDVAAR
GIDLPNLSLVIHADLPTNTESLLHRSGRTGRAGKKGISALIVPPKSVGKAERLLKWAKIT
AEWTVPPSAEDISARDEEKLLNDPSWQMGVPEEQAEFAARLLEAHGPEAVAAALVRMHLA
RHSAPEDLQSPDTPARRDTKSFGPSRWFALSAGRNDRAEARWLLPLILRATDLEKDAIGA
IRVQDTETFVEIAATRAAAFEGALGADGMLADNITARAVEGEPEFARRPSGPRRDDGFRK
GPKPHRGRGDDRDDRGARPERKPRPPREDRPERTERAERPAPAPAAKSAPVSEAAPRAEA
SAAPAADTPRPKKPAARPEGRSEGKPAGKFTQRTEGKGYGKPNRERSDRDGPKKPYKPRT
TKDGDAAPAKPAYRSNASDPSQRMSRGPAKGPGKGPAKGPGKGSFKGTPKDGAKGPSKFK
GKTGGKPRPGGTEPPRRKG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgccctgaccgacgcgctgaccgagcgcggttacgacaccctcacccccgtg
caggaggccgtgaccgcaccggacgccgatgggcgcgacctgctggtttcggcgcagacc
ggatcgggcaagacggtgggcttcggccttgccatcgcgccgacgcttctgggcgaggat
caggccttcggccccgccggcacgccgctggcgctggtcgtggcccccacccgcgaactg
gccttccaggtcatgcaggagctgcgctggctgtatgaaaagaccggcgccatggtgaat
tcctgcgtcggcggcatggacgtccggcaggagcggcgcttcctcgaacgtggcacgcat
atcgtcgtgggcacgcccgggcggctctgcgaccacatccggcgcggcgcgctggacctg
agcgacgtgcgcgccgtggtgctggacgaggccgacgagatgctggacctgggcttccgc
gaggatctggagttcatactccagaccgccccggccgagcggcgcacgctgctgttctcg
gccacggtctcgccggtcatcgggcgcatcgccgaggaattccagaaggacgccttccgg
atcaacacgatcaacaaggccaagcagcacgccgacatcgcctacaaggcgctgcgcgtg
gcgcaggcggattcggatcacgcgatcttcaacctgctgcgctttcacgacgacgaaagc
gccatcgtctttgccaacacccgcgcgcaggtgaatcacctgaccgcacggttgcacaac
cgcggcctgtcggtggtgtcgctgtccggcgaactgagccagcaggaacgcacgcacgcg
ttgcaggcgatgcgcgacggccgggcgcgggtctgtgtggcgaccgacgtggcggcgcgg
ggcatcgacctgccgaacctgtcgctggtcatccacgccgatctgccgaccaacaccgaa
agcctgctgcaccgttcgggccgcaccgggcgcgcgggcaagaagggcatctcggccctg
atcgtgccgccgaagtcggtgggaaaggcggagcgcctgctgaaatgggcgaagatcacc
gcggaatggaccgtgcctccctcggcggaggatatctcggcgcgcgacgaggaaaagctg
ctgaacgatccgtcctggcagatgggcgtcccggaggagcaggccgagttcgccgcccgc
cttcttgaggcgcacgggccggaggcggtggccgccgcgctggtccgcatgcacctggcg
cgtcattccgcgccggaagacctgcaaagccccgacacgcccgcgcgccgcgacaccaag
agctttggcccgagccgctggttcgcgctgtcggcgggccgcaacgaccgggcggaagcg
cgctggctgctgccgctgatcctgcgcgccacggatcttgaaaaggacgccatcggcgcg
atccgggtccaggacaccgagacatttgtcgagatcgccgccacccgggctgccgccttc
gaaggcgcgctgggggccgacggcatgctggccgacaacatcaccgcccgtgccgtcgag
ggagagcccgagttcgcgcgccgcccctccggcccgcgccgcgacgacgggttccgcaag
gggccgaagccgcatcgcggccgtggcgatgaccgggacgaccggggcgcccggccggag
cgcaagccgcgcccgccgcgtgaagaccgccccgagcggaccgagcgggcggaacgccct
gcccctgccccggccgccaaatccgccccggtgagcgaagccgcgccgcgggccgaggcc
tctgccgccccggccgccgacacgccgcgcccgaagaagcccgccgcacggccggagggc
aggtccgaaggcaagccggcgggcaagttcacccagcgcaccgaaggcaagggatacggc
aaaccgaatcgcgagcggtcggaccgggacggcccgaagaagccctacaagccgcgcacg
accaaggacggcgacgccgccccggcgaaacccgcctaccgcagcaatgcctccgacccg
tcgcagcgcatgtcgcggggaccggcgaagggccccggcaaggggcctgccaagggtccg
ggcaaggggtcgttcaagggcacgccgaaggacggcgccaagggtccgtcgaagttcaag
ggcaagaccggcggcaagccgcgccccggcgggacggaaccgccgcgccgcaagggctga
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