Sagittula sp. MA-2: QNI11_21365
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Entry
QNI11_21365 CDS
T11138
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sagz Sagittula sp. MA-2
Pathway
sagz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sagz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNI11_21365 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sagz03021
]
QNI11_21365 (rho)
03019 Messenger RNA biogenesis [BR:
sagz03019
]
QNI11_21365 (rho)
Transcription machinery [BR:
sagz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QNI11_21365 (rho)
Messenger RNA biogenesis [BR:
sagz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QNI11_21365 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
S1CSD-TOTE-2
AAA_22
AAA_25
ATPase_2
OB_RNB
AAA
Motif
Other DBs
NCBI-ProteinID:
WHZ35163
LinkDB
All DBs
Position
complement(4381535..4382806)
Genome browser
AA seq
423 aa
AA seq
DB search
MSEEKLNLADLKAQSPKDLLAMAEELEIENASTMRKGEMMFQILRERADEGWLIYGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRKYSLRTGDSIEGEIRAPDNEERYFALVS
VAAINFEDPERARHKIAFDNLTPLYPDERLKMEIEDPTIKDRSARIIDLVSPIGKGQRSL
IVAPPRTGKTVLLQNIAASIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEP
ATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAIDILKSGTRKEDLLVDKIDLQKTFVLRRILNPMGTTDAIEFLLSKLKQTKTNSEFFDS
MNS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaaactgaaccttgccgatctgaaagcgcaaagccccaaggaccttctg
gccatggcggaagagctggagatcgagaacgcctcgaccatgcgcaagggcgagatgatg
ttccagattctccgggagcgggccgacgaaggctggctcatctacggggacggcgttctg
gaggtgctccaagacggtttcggtttcctccgctctccggaagcgaactacctgccgggt
ccggatgacatctacgtgtcgcccgacatgatccggaagtattcgctgcggacaggcgac
agtatcgagggcgagatccgcgcgcctgacaacgaggagcgctactttgccctggtgtcc
gtggctgcgatcaacttcgaagatccggaacgggcacgccacaagatcgccttcgacaac
ctgacgccgctgtatcccgatgaacgcctgaagatggagatcgaggatccgaccatcaag
gaccgttccgcccggatcatcgacctggtgtcgcccatcggcaagggccagcggtcgctg
atcgtcgcgccgccgcgcacaggtaagacggtgctgctgcagaacatcgcggcgtcgatc
gagaagaaccacccggagtgctacctgatcgtccttctgatcgacgagcgtccggaagaa
gtgaccgacatgcagcgttcggtgaaaggcgaggtgatctcctcgaccttcgacgaaccg
gcgacacggcacgtggccgtcagtgaaatggtgatcgagaaggccaagcgtcttgtcgaa
cataaacgagatgttgttattcttctcgactccatcacaagacttggtagggcgttcaac
actgttgttccgtcgtccggcaaggttctcaccggcggtgtcgatgcaaacgccctgcaa
cgtccgaagcgtttcttcggtgcagcccggaacatcgaggaaggcggttcgctgaccatc
atcgcgacggcgctgatcgacacgggttcgcgtatggacgaagtcatcttcgaagaattc
aagggcaccggcaactccgagatcgtgctggaccgcaaggtggcggacaagcgggtcttc
ccggccatcgacatcctcaagtccggtacccggaaagaggatctgctggtcgacaagatc
gacctgcagaagacatttgtgctgcgccgtatcctgaacccgatgggtacgaccgacgcg
atcgaattccttctgtcgaagctcaagcagaccaagaccaactccgaattcttcgattcg
atgaacagctga
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