Staphylococcus aureus subsp. aureus JH1 (MRSA/VSSA): SaurJH1_1361
Help
Entry
SaurJH1_1361 CDS
T00556
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sah
Staphylococcus aureus subsp. aureus JH1 (MRSA/VSSA)
Pathway
sah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SaurJH1_1361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sah03019
]
SaurJH1_1361
Messenger RNA biogenesis [BR:
sah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SaurJH1_1361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
vATP-synt_E
HTH_10
Imm49
Motif
Other DBs
NCBI-ProteinID:
ABR52212
LinkDB
All DBs
Position
1393178..1394902
Genome browser
AA seq
574 aa
AA seq
DB search
MNSEFIYGRVTNLGGKILSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLM
FPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTI
ALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVY
TGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFA
KVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLI
PITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVI
IANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAK
LAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLL
AEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLREAEEKVREIVEAGLQEKRI
EWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgagtttatatatggacgggtaacaaatttaggaggtaagattttgagttta
ataaagaaaaagaataaagatattcgcattataccattaggcggtgttggcgaaattgct
aaaaatatgtatatcgttgaagtagacgatgaaatgtttatgttagatgctggacttatg
tttccagaagacgaaatgctaggtattgatattgttataccagacatttcatacgtactt
gaaaataaagataaattgaagggtatattccttacacacggacatgagcacgcgattggt
gcagtgagttatgttttagaacaattagatgcaccagtatatggatctaaattgacaata
gcgttaattaaagaaaatatgaaagcccgtaatattgataaaaaagttcgctactacaca
gttaacaatgattcaattatgagattcaaaaacgtgaatattagtttctttaatacgaca
cacagtattcctgatagtttaggtgtttgtattcacacttcatatggtgccattgtgtat
acaggtgaatttaagtttgaccaaagtttacatggacattatgcaccagatattaaacgt
atggcagagattggtgaagaaggcgtatttgtcttaatcagtgattctactgaggcagag
aaacctggatataatactccggaaaatgtaattgaacatcatatgtatgatgcttttgca
aaagtgcgaggtcgcttgattgtttcatgttatgcttcgaactttatacgtattcagcaa
gttttaaatattgctagcaagctaaatcgtaaagtgtcatttttaggaagatcacttgaa
agttcatttaatattgctcgtaaaatggggtatttcgacattcctaaagatttgctaatt
cctataacagaagttgataattatcctaaaaatgaagtgataattatagctactggtatg
caaggagaacctgtagaagccttaagtcaaatggcgcaacataagcataaaattatgaat
atcgaagaaggcgattctgtatttttagcaattacggcttctgctaatatggaagttatc
attgcgaatacattaaatgagcttgtacgtgctggcgcacatattattccaaataacaag
aagattcatgcttcaagtcatggttgcatggaagaattaaaaatgatgattaatattatg
aaacctgaatactttattcctgtacaaggtgaatttaaaatgcagatagcacatgcgaag
ctagcagctgaagcaggtgttgcaccggaaaagattttccttgtggaaaaaggagatgtc
attaattacaacggtaaagatatgatattaaatgaaaaggtaaattcgggaaatatttta
atagatggtattggtattggggatgtaggaaatatcgtgttgagagaccgtcatctttta
gcagaagatggtatctttattgctgtagtaacgttagatcctaaaaatagacgtatagct
gcgggtcctgaaattcaatctcgtgggtttgtatatgtacgtgaaagtgaagacttatta
cgtgaagcagaagagaaagtacgtgaaatagtagaagctggtttacaagaaaaacgcata
gaatggtctgaaattaagcaaaatatgcgtgatcaaattagtaaactattattcgaaagt
acaaaacgtcgtcctatgattattccagtaatttctgaaatttaa
DBGET
integrated database retrieval system
