Salinimicrobium tongyeongense: JRG66_01910
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Entry
JRG66_01910 CDS
T08572
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sahn
Salinimicrobium tongyeongense
Brite
KEGG Orthology (KO) [BR:
sahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sahn03009
]
JRG66_01910 (rimO)
Enzymes [BR:
sahn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JRG66_01910 (rimO)
Ribosome biogenesis [BR:
sahn03009
]
Prokaryotic type
ribosomal protein modification factors
JRG66_01910 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UZH55669
LinkDB
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Position
complement(439074..440420)
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AA seq
448 aa
AA seq
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MRTKSLKKNRINVVTLGCSKNVYDSEVLMGQLKANNKDVVHEQEGNIVVINTCGFIDNAK
EQSVNTILEYVELKEQGEVDKVFVTGCLSERYKPDLVKEIPNVDQYFGTTELPELLAALE
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSAPIENLVAEAKKLA
AQGVKELILIAQDLTYYGLDLYKKRNLAELLENLAKVEGIEWIRLHYAFPTGFPMDVLDL
MKREPKICNYLDIPLQHISDDLLKSMRRGTTHEKTTNLLKEFRNRVPEMAIRTTLIVGYP
GETEAHFEELKQWVKDMRFERLGCFTYSHEENTHAYKLEDDVPQEVKQERANEIMEIQSQ
ISWELNQQKIGKTFRVIIDRKEGENYVGRTEHDSPDVDNEVLIDARNIYLKTGHFYEVKI
TDAADFDLFGEPVNANVEKPKRKVLFNQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaagtcattaaaaaagaacaggatcaatgtggtcacccttggctgcagtaag
aacgtctatgacagcgaggtgcttatgggccagctgaaggcgaacaataaggatgtggtg
catgagcaggaggggaatatcgtggtgatcaacacctgtggctttattgataatgcaaaa
gaacaatcggtaaacaccattttagagtatgttgagctgaaggagcagggggaagtggat
aaagttttcgttaccggttgcctaagtgaacgctacaaaccagatcttgttaaggagatc
ccaaatgtggatcaatacttcggaactaccgaacttcccgaactcctggccgctcttgaa
gccgattataagcacgaacttattggagaacgtttaaccacaactcctaaaaattacgct
tacctcaagatcgccgaaggctgcgataggccgtgttctttttgtgcaattccgcttatg
cgtggaaagcacaaatctgctcctatagaaaacctggtggccgaagctaaaaaacttgcc
gctcagggagtaaaggaacttatccttattgcgcaggatcttacctactacggcctcgat
ctctataaaaagcggaatttagctgaacttcttgaaaacctggcaaaggtggaaggcata
gaatggatcaggttacattatgcttttccaacgggcttccctatggatgtgctcgacctc
atgaagcgtgagccaaagatctgtaactatctcgatattccgttgcagcatatttctgat
gatttgctgaagtccatgcgccgcggaacaacccatgaaaaaacaacaaatctgctgaag
gaattcagaaacagggtgcctgaaatggccattagaaccacgcttattgtgggatatccc
ggcgagactgaagcccactttgaagagctgaagcagtgggtgaaagacatgcgttttgag
cgccttggctgttttacgtattcacacgaagaaaatacacatgcttacaagctcgaagac
gatgtgccgcaggaggtgaagcaggaacgtgccaacgagattatggaaattcagtcacag
atctcctgggagctgaatcagcaaaagattggtaagaccttcagggtgatcatagatagg
aaagaaggagagaactacgtgggaagaacagaacacgattcccccgatgttgataacgaa
gtactcattgacgccaggaacatctacctcaagaccggtcacttctatgaagtgaagatc
accgatgccgccgattttgacctttttggagaaccggtaaatgccaatgtcgagaaacca
aagcggaaggtgcttttcaatcagtaa
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