Salinimicrobium tongyeongense: JRG66_05100
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Entry
JRG66_05100 CDS
T08572
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sahn
Salinimicrobium tongyeongense
Brite
KEGG Orthology (KO) [BR:
sahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sahn03032
]
JRG66_05100 (topA)
03400 DNA repair and recombination proteins [BR:
sahn03400
]
JRG66_05100 (topA)
Enzymes [BR:
sahn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JRG66_05100 (topA)
DNA replication proteins [BR:
sahn03032
]
Prokaryotic type
DNA Topoisomerases
JRG66_05100 (topA)
DNA repair and recombination proteins [BR:
sahn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JRG66_05100 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Ntox17
Motif
Other DBs
NCBI-ProteinID:
UZH56244
LinkDB
All DBs
Position
complement(1172162..1174705)
Genome browser
AA seq
847 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDYTVASSFGHIADLPAKELGVDTEGDFTPKYIVSKDK
KDVVKKLKSLAKSAEMVWLASDEDREGEAIAWHLAEELDLDKNKTKRIVFHEITKSAILR
AIENPRGINYNLVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
EIQGFIPEASFRIDAEFTNEEGKSFKAKLPKNFDTKAEAEQFLSDNLGANFKVADLTTKP
AKKSPAPPFTTSTLQQEAARKLYFSVSKTMTMAQRLYEAGHITYMRTDSVNLSDDARKGA
KKEILDAYGEKYSKTRQFKGKTKGAQEAHEAIRPTNFAAHSVQADRDEQRLYELIWKRAI
ASQMSEAELERTNVKIEADKHDKQFTANGEVLKFEGFLKVYLEGRDEEDEELQEQEGMLP
ALRVNEKLENNHITATERFTRPPYRYTEASLVKKLEELGIGRPSTYAPTISTIQNRNYIE
KGSVDGVERDYVQLTLKAEKISEKKLTETVGSDKGKLVPTDVGMVVNDFLVNHFSSILDY
NFTAKVEQDFDDIAEGNEEWTKMMKDFYSDFHPHVLDVAQNAEREVGERILGEDPVTGKP
VSVRLGKFGPMVQMGSVEDEEKPKFASLSPDQTLDSVTFEEAMELFKLPKELGEYEGEKV
EVNNGRFGPYVRYGKKFVSLEKGEDPIAVTMDRALELIKAKEKADAPIYEYKDLPVQKGV
GRFGPYLKWNDMFINVNKKYDFDNLSAEDIEELIEDKIRKEREKVIHNWEEEGIRVEKAR
WGRSNIIKGKTKIELPKTVDAAKLSLEEVKDILEKKAPKKKAAKKTAASKKTGTKKTTRK
KTVSKKE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtgattgtagagtcccccgcaaaggctaaaactattgagaaattt
ctcggcaaagattacactgttgcttccagttttggtcatattgccgacttgccagcaaaa
gagctgggcgtagataccgagggcgattttactcctaaatatatagtgtctaaagacaag
aaagacgttgttaaaaaactgaagagccttgcaaagagcgccgagatggtttggctggcg
agtgatgaagaccgggagggggaagctattgcgtggcacctggccgaagagctggatctt
gataagaacaaaaccaaaaggatcgtttttcacgagatcacaaaatcggctattctcaga
gcaatcgaaaacccaagagggatcaattacaacctggtaaatgcccagcaggcacggcgt
gtgttggacaggcttgtgggctatgagctttctcctgtgctttggagaaaagtaaaagga
ggcctttcggcaggaagggttcaaagtgtgtcggtgaggttgattgtggagagagagcgc
gaaattcagggttttattcctgaagcttccttcaggattgatgccgaatttaccaatgag
gaaggtaaatctttcaaagcaaaacttcctaaaaattttgataccaaggctgaagccgaa
cagttcctttcagataacctgggtgcgaatttcaaggtggccgatcttacgaccaaaccg
gctaaaaagtccccggcaccaccctttacaacctcaacacttcagcaggaagctgcccga
aaattatatttttcagtaagtaagaccatgaccatggcgcagcgtctctatgaggcgggg
catattacttatatgagaaccgatagcgtcaacctttctgatgacgcaagaaaaggtgcc
aaaaaagagattttagacgcctacggtgaaaagtacagcaagacacgtcaattcaaagga
aaaacaaaaggggcgcaggaagctcacgaggccattaggccaacaaattttgcggcccac
agcgtgcaggccgatcgcgatgaacagcgcctgtatgaattgatctggaaacgtgccata
gcttcccaaatgagcgaagccgaactggaaaggaccaatgtgaaaattgaagccgataag
cacgataaacagttcactgccaacggggaggttttaaaatttgagggtttcctgaaagtt
tacctggaaggccgcgacgaagaggatgaagaattacaggaacaggaaggcatgttgccg
gcactacgggtgaacgaaaaacttgaaaataatcatatcacggccaccgagagatttaca
cggcccccttaccgctatactgaagcttctttggtaaagaaactcgaagagctgggaata
ggacgcccgtctacctacgcgccaaccatttctacaattcaaaaccggaattatatcgaa
aaaggatcggttgacggggtggagcgtgattatgtgcagcttacattaaaagctgaaaaa
atcagcgaaaagaaacttacggaaactgtaggtagtgataagggcaaacttgtgccaacc
gatgttgggatggtggtgaacgattttcttgtcaaccatttctcaagcatcctcgattac
aactttaccgccaaggtagagcaggattttgatgatattgctgaaggaaatgaggagtgg
accaagatgatgaaagatttctacagtgattttcaccctcatgtgctcgatgttgcccaa
aatgcggaaagggaagttggcgaaagaattttaggggaagatcctgttaccggaaagccg
gtgagtgtgcggctcgggaaatttggacccatggtgcagatgggatctgtagaggatgag
gagaagccaaaatttgccagcctttctccagatcaaacccttgattcagtcacttttgaa
gaggcgatggagctgtttaaacttccgaaggaactaggggaatatgaaggggaaaaagtg
gaagtgaacaacgggcgttttggcccttacgtgcgctacgggaaaaaattcgtttcgctt
gaaaaaggggaagatcctatagccgtaaccatggatcgtgcgctcgagttgatcaaggca
aaagaaaaagccgatgcgcctatctatgaatacaaagatcttccggttcaaaaaggggtg
gggcgttttgggccttacctcaaatggaacgacatgttcataaacgtgaacaaaaagtat
gattttgataatctttccgcagaagatattgaagagcttattgaagataagataaggaaa
gagcgcgagaaggtgatccataactgggaagaggaaggaatcagggtagagaaagccagg
tggggacgttcaaatattattaaaggcaagacaaaaattgaattgccaaagactgtagat
gctgcaaaactgagtcttgaagaggtgaaggacatactcgagaaaaaagctcccaagaaa
aaggccgctaaaaaaactgccgcttcaaagaagaccgggaccaagaaaaccacccgtaaa
aaaactgtttccaaaaaggagtaa
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