Salinimicrobium tongyeongense: JRG66_06000
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Entry
JRG66_06000 CDS
T08572
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
sahn
Salinimicrobium tongyeongense
Brite
KEGG Orthology (KO) [BR:
sahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sahn03019
]
JRG66_06000
03009 Ribosome biogenesis [BR:
sahn03009
]
JRG66_06000
Messenger RNA biogenesis [BR:
sahn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JRG66_06000
Ribosome biogenesis [BR:
sahn03009
]
Prokaryotic type
rRNA processing factors
JRG66_06000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF6305
DUF1093
Motif
Other DBs
NCBI-ProteinID:
UZH56413
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All DBs
Position
1362916..1364457
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AA seq
513 aa
AA seq
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MNKELIIRTGSSAVDFALLKDGKLIELNKEEDDSNFAVGDIFLAKVRKTVPGLNAGFVNV
GYTKDAFLHYHDLGPQVLSLLKFIKRVSTGKLKDYSLKDFPLEKDIDKDGSIADVLKSNQ
SLLVQVVKEPISTKGPRISSELSLPGRYIVLVPFSNRVSVSQKIESKEEKDRLKRLVKSI
RPKGFGIIVRTVAEGRKVAELDNDLQNLMSRWTGMCKKLYKAPHPSKVLGELNRASSILR
DVFNDSFTSICVDDETLYTQIKDYVSEIAPKKESIVKLYDSNIPIFEKFGIERQIKTTFG
RTVSMNKGAYLVIEHTEAMHVIDVNSGNRSNKSKNQEDTALEVNLISATEIARQLRLRDM
GGIIVVDFIDMNKAENRKALYDHLKQEMSDDRAKHKILPPSKFGLVQITRQRVRPEMNIK
TREENPNKNGEEIEAPIVLVNRINQDLQKLLKKDYKKITLSAHPFIAAFLTKGFPSPRSK
WFFDHKKWVKIVPRDAYTYLEYHFHDNAGEVIQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaagagttaattattagaaccggttcctctgctgtagattttgccttattaaaa
gatggaaaactaatagaactcaacaaggaagaagacgacagtaattttgcggtgggagat
atttttctcgccaaagtgcgaaaaactgttcccggcttaaacgccggcttcgtaaatgta
ggctatacaaaagatgcgtttttgcattatcacgaccttggcccgcaggtactttctttg
ctgaagttcataaaacgtgtaagcacaggtaaattaaaggattactcccttaaggatttt
cctttagaaaaggatattgataaggacggaagcattgcagatgtcttaaaatcaaatcaa
tcgctactggtacaggtagtaaaagagcccatatcaaccaaaggccccagaataagttct
gaactttccctcccgggccgttatatcgtgttggtccctttttcaaaccgcgtctctgtt
tctcagaaaatagaaagcaaagaagaaaaagaccgtctaaaacgattggtaaaaagcatt
agaccaaaaggctttggcattattgtacgtaccgtagcagaaggcagaaaagtagcagaa
ctggacaacgaccttcagaatttaatgagccgttggacaggtatgtgtaaaaagttgtac
aaagcgcctcatccctcaaaagtactgggcgaattaaacagggcatcttctattcttaga
gatgtttttaatgattcgtttacctctatttgtgtagacgatgaaaccttgtacacacaa
attaaagattatgtgagcgaaattgctccaaagaaagaatccattgtaaaattgtacgac
tcaaacatccccatcttcgaaaaatttgggattgaaagacaaatcaaaactacttttggc
cgcaccgtatctatgaacaaaggggcatacctggtcattgagcacaccgaagccatgcac
gttattgacgtgaatagcggaaaccgctcaaacaaatcaaagaaccaggaagataccgca
cttgaggtaaacctcataagcgctaccgaaattgcccgccagctgcgccttcgcgacatg
ggagggattattgtagttgactttatagacatgaacaaagctgaaaacagaaaagctttg
tacgatcatcttaaacaggagatgagtgacgaccgcgcaaaacacaagattttgccccca
agtaagtttggacttgtacaaattacaaggcaacgggttagacccgaaatgaacatcaaa
acaagggaagaaaaccccaataagaacggggaagaaattgaagccccaattgttttggta
aaccggatcaaccaggatttgcaaaagcttcttaaaaaagactataaaaagatcactcta
agtgcacatccttttatagcagcctttttaaccaaaggttttccatcaccccgctccaag
tggttctttgatcataaaaagtgggttaaaatagtaccaagagatgcttacacgtatctt
gaataccactttcacgacaacgccggggaagtgattcaataa
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