Salinimicrobium tongyeongense: JRG66_07820
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Entry
JRG66_07820 CDS
T08572
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sahn
Salinimicrobium tongyeongense
Pathway
sahn03410
Base excision repair
sahn03430
Mismatch repair
sahn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sahn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JRG66_07820 (recJ)
03430 Mismatch repair
JRG66_07820 (recJ)
03440 Homologous recombination
JRG66_07820 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sahn03400
]
JRG66_07820 (recJ)
DNA repair and recombination proteins [BR:
sahn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JRG66_07820 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JRG66_07820 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JRG66_07820 (recJ)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF6880
Motif
Other DBs
NCBI-ProteinID:
UZH53923
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Position
1776806..1778503
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AA seq
565 aa
AA seq
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MRWTLKPKPDPKTVAHLVEVLGVEEPIASLLAQRGIETFEEAKKFFRPSLEDLHDPYLMK
DMEAAVKRIELALQKGENIMVFGDYDVDGTTSVALVSSYLKSIYPNIATYIPDRYEEGYG
VSYKGIDFAADNDISLIIALDCGIKAIEKVAYAAGKGIDFIICDHHRPGATIPNAVAVLD
PKREDCEYPYKELCGCGVGFKLLQALNEKRGEPFELLIPYLDLVATAIGADIVPVTGENR
ILAYHGLQVINLAPRPGIKAILAQVKKEQLTLTDVVFIVAPRINAAGRMKHGLHAVNLLT
EEDPEKAKEFAAEIEAYNTSRRDTDKVITEEALAQINELREQDRKTTVVYRENWHKGVIG
IVASRLTETYYRPTLVFTRSGEKLAASARSVSGFDVYDALEGCSEFIEQFGGHKYAAGLT
LLSHQYDNFKRKFEEVVSATIDPRLLTPEIQIDAEIDLSDITAKFHRILKQFAPFGPGNM
SPVFMTKNLRDTGYARCVGGEDKHLKARFFQKGNDRSFDAIGFDLGRKCELVSEGKKVKA
AFCIDENEFQGNVTLQLRLKDLEVN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggaccctcaaacccaaacccgatcccaaaaccgtagcacatcttgtagaagtc
ctgggcgtggaggagcctatcgcttctttactggctcagcgcggtatagaaacattcgag
gaggccaaaaaattctttcgtcccagtcttgaagaccttcatgacccgtatttaatgaaa
gacatggaagcggcggtaaagcgtattgagctcgcccttcaaaaaggggaaaatatcatg
gtctttggagactatgatgtagacggtactaccagtgtggcactggtttcttcttacctc
aaaagcatctatcccaatattgcaacttacattccagacaggtatgaagaaggatacgga
gtgtcttataaagggatagactttgcggccgataatgacattagccttatcattgccctt
gactgcgggattaaagccattgaaaaagtggcttatgccgccgggaaagggatcgatttt
attatttgtgaccatcacaggccgggggcaacgatacctaacgcggtagccgtgctcgac
ccaaaaagagaagattgtgagtatccctacaaagagctctgcgggtgtggtgtgggtttt
aagctgttacaagcgctaaatgaaaagcggggagagccttttgagctgcttatcccatac
cttgacctggtggccacggctattggggccgatatagttccggtgaccggagagaacagg
attttggcttaccacggcctgcaggtgataaaccttgcaccgcgccccgggataaaagcc
attcttgcccaggtcaaaaaagagcagctcacgcttacagatgttgtatttatagtggcg
ccgcgcatcaatgcggccggaagaatgaagcacgggttgcacgccgtaaaccttttaact
gaagaagaccccgaaaaagcaaaagaatttgctgcggaaattgaagcctacaacacaagc
cgccgcgataccgataaggtcattaccgaagaagcacttgcccagattaatgaactaagg
gagcaggatcgcaaaactacggtagtgtaccgggagaactggcataaaggggtgattgga
attgtggcgtcaaggcttaccgaaacctactataggcctaccctggtctttacccgtagc
ggagagaaacttgcggcatcggcacggtctgtaagtggctttgatgtctacgacgctctc
gaaggctgcagcgaattcattgagcagtttggcgggcataaatatgcggcgggtctaacc
ctgctttcccaccagtatgataatttcaagcgaaaatttgaagaggtggtttcggctaca
atagatccgcgcctgctaacgcccgagatccagatcgatgccgaaatagacttaagcgat
attacggctaaattccacaggatcctcaagcagtttgccccttttggccccgggaatatg
tcgcctgtatttatgactaaaaatttgcgcgataccggctatgcgcgttgcgtggggggt
gaagacaagcacctgaaagcccgcttttttcaaaaagggaatgaccgaagctttgacgcc
ataggttttgatttgggcaggaagtgtgagctggtgagtgagggcaaaaaagtgaaagct
gccttttgtatagacgaaaatgaatttcagggcaatgtgacgctgcagttgagactaaaa
gatttagaggtaaattaa
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