Salinimicrobium tongyeongense: JRG66_12640
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Entry
JRG66_12640 CDS
T08572
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sahn
Salinimicrobium tongyeongense
Pathway
sahn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sahn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JRG66_12640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sahn03400
]
JRG66_12640
Enzymes [BR:
sahn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JRG66_12640
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JRG66_12640
DNA repair and recombination proteins [BR:
sahn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JRG66_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
UZH54807
LinkDB
All DBs
Position
2861422..2862207
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AA seq
261 aa
AA seq
DB search
MPELPEITLYKDYLDATSLNKKITAIDFLHTGGLQASKKAFTEAFKGKRLKCSRRLGKYL
FIETTGDKALVLHFGMTGKLEYFKNQEPPKYSEIVFSFEDNDHLAFICKRKLGKIFIAES
FEGFRQEKELGRDALELSEGEFLELFEGKTGSIKGVLTDQHVLAGIGNLYSDEMLYQCKI
HPKTKTNTLTAANKKQMYKKMRQVLETAIEKEGVRKDFPDSYLIKHRKEGDGCPACDGKV
KKIKVSGRSTYFCPSCQKEQK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactacccgagatcacgctgtacaaagattacctcgatgctacatcgctcaac
aaaaaaatcactgcaatcgattttttacataccggcggattacaggcgtcaaaaaaggcc
tttacagaggcttttaaaggaaaaagattgaagtgtagccgcaggttggggaagtaccta
tttattgaaactacgggagataaggccctggtgctgcattttggaatgacaggaaaactg
gagtatttcaaaaatcaggagccgccaaaatattcagaaatagtcttttcttttgaagat
aatgatcacctggcgtttatatgcaaaaggaagctgggcaagatctttattgctgaaagt
tttgaaggtttcaggcaggagaaggaactggggcgggatgcgcttgaactatcagaaggc
gaattccttgaattgtttgaaggtaaaaccggaagcattaaaggagtgttaaccgatcaa
catgtactggccggaatcggcaatttgtattctgacgaaatgctgtaccagtgtaagatc
caccctaagaccaaaaccaacacacttacggcagcaaataagaagcaaatgtataagaag
atgaggcaggtgcttgaaactgccattgaaaaggagggagtgcgaaaggattttcccgat
tcctaccttatcaaacaccgaaaagaaggtgacggctgccctgcctgtgacgggaaggtc
aaaaagatcaaggtctccggccgcagcacttacttttgcccatcctgtcaaaaagagcaa
aaatga
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