Sulfolobales archaeon HS-7: HS7_05420
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Entry
HS7_05420 CDS
T08110
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sahs
Sulfolobales archaeon HS-7
Brite
KEGG Orthology (KO) [BR:
sahs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sahs03016
]
HS7_05420
Enzymes [BR:
sahs01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HS7_05420
Transfer RNA biogenesis [BR:
sahs03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HS7_05420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
BCU67105
LinkDB
All DBs
Position
complement(580164..580718)
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AA seq
184 aa
AA seq
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MASEQTIDGVLIGDKVVVFDIQSSKRLYIYSYFGKPVGVNKAKDVNTPLELSLVEAVYLS
ERSMLRVRDIDNRVIGYSELMEKAKGYNRRFDELFTVYKSLREKGFIVRSGLKYGADYAL
YNLGPGLEHAPYLVIALKDDRNLLANEIMGFGRVSHSVRKKLILAFVNSKFNTVRYVTFK
WVRL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttggcaagtgagcagacaatcgatggagttctaatcggcgataaagttgtagtattcgat
attcagagctcaaaacgactttacatttacagctacttcggaaaaccagtaggagtaaat
aaagcaaaggatgtcaatacgccgttggagctttcactcgtcgaagcggtttacctaagt
gagcgctcgatgctcagggtaagggatatagataatagggtgataggatatagtgaatta
atggagaaggcaaagggttacaacaggcgttttgatgaactttttacagtatacaaatct
ctaagagaaaagggatttattgtaagatctggattaaaatacggagctgattacgcacta
tacaacttaggaccggggctagaacatgcaccatatttagtaatagcgttgaaggatgat
cgtaatcttcttgcaaacgagataatgggcttcggtagagtatctcatagtgttagaaaa
aaacttatacttgcttttgtcaattcaaaatttaatactgtaagatacgtaacatttaaa
tgggtaagattataa
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