Sulfolobales archaeon HS-7: HS7_06090
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Entry
HS7_06090 CDS
T08110
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sahs
Sulfolobales archaeon HS-7
Pathway
sahs03022
Basal transcription factors
sahs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sahs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HS7_06090
09124 Replication and repair
03420 Nucleotide excision repair
HS7_06090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sahs03021
]
HS7_06090
03036 Chromosome and associated proteins [BR:
sahs03036
]
HS7_06090
03400 DNA repair and recombination proteins [BR:
sahs03400
]
HS7_06090
Enzymes [BR:
sahs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HS7_06090
Transcription machinery [BR:
sahs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HS7_06090
Chromosome and associated proteins [BR:
sahs03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HS7_06090
DNA repair and recombination proteins [BR:
sahs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HS7_06090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
PhoH
nSTAND3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
BCU67172
LinkDB
All DBs
Position
643980..645626
Genome browser
AA seq
548 aa
AA seq
DB search
MQLRTWQSKAFDKVINEIKENKIVALQSPTGSGKTLFALFVGFKEFKKILFVVRTHNQFY
PVYKEILNNFPDKSFSFLTGKPVSCVYADKTVEPEDINCKFCNIFTAIQVKVDRPPFQFL
DSLKELGAEEGFCPYHSLHLSAEKSDVLTITYPYLFLPPLRETLDIDLEEYFIVIDEAHN
LDSLSDYDERTLSEQTLVSAMSQSSSTSVNKILEKLRLFVKKNVNPNDKYVEVKNLLRLD
EDEEELVEDEYIKLRDKMILDRKIRKNYIGSVIKFVKSLKEENVKLFSISGKLVIKKLDI
SKYLEILEKSNLAILMMSGTLPPPEYISKVWGIKREISYIDVESEFGLKGWGRKNFLLAK
DVTTSYSFRSEIMWRKYASYLMRIYYSSINNVLAVTPSYETLQKISTLLENNISVIVENK
DTTIEDIEKAIKRGKTLIMGVARGKFSEGIEFTENRRSLITDIAIVGIPYPSTDDFAKAK
IETISKRVNGDVRELLFSIPALVAVRQIIGRAIRNEFDSPNIWLLDKRFDSEWWKNKLGA
FNAKKIRL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgcagttaaggacatggcaatctaaagcgtttgacaaggtgataaatgagataaaagaa
aacaagatcgtagcgttacagtctcctacaggttctggaaaaacattatttgccttattc
gtaggatttaaggaatttaaaaaaattctattcgtcgtaagaacacataatcagttttat
ccggtatataaggagatcttgaataactttcctgacaaatccttctcgttcctaactggt
aaaccagtttcttgtgtctatgcagataaaactgttgaaccagaggatattaattgtaaa
ttttgtaacatattcactgcaattcaagtaaaggtagacagacccccttttcaatttctc
gattcccttaaagagcttggagcagaagaaggattctgcccttaccattccctccatcta
tcagcggaaaaaagtgacgtattaactataacttacccctacctgtttttacctcctctt
agggagaccttggatatagatcttgaggaatactttatagtgatcgatgaagcccacaat
cttgatagcctttcggattacgatgaaagaaccttatcagaacagactctagtaagtgct
atgtctcagtcctcctcgacatcagtaaacaaaattcttgagaagttgcgattatttgta
aagaaaaacgtcaatccaaatgataaatacgttgaggtaaagaatcttctaaggcttgat
gaagacgaggaggaacttgttgaagacgagtatataaagctcagggataaaatgatcctt
gacagaaaaataaggaaaaattacataggaagcgtaatcaaattcgtaaaatcacttaaa
gaagaaaacgtaaagcttttctcaatatctgggaaacttgttataaaaaagttagatata
tctaaatatctggaaatattagaaaaaagtaatctggcaatactaatgatgtctggcaca
ttgcctcctccagaatacataagtaaagtatggggtataaagagagaaatatcgtacata
gatgtggagagcgaatttgggcttaaagggtgggggaggaagaacttcctcctagccaag
gatgtaacgacctcctactcgtttagaagtgagatcatgtggaggaagtacgcttcatac
ctcatgaggatctattacagttctatcaataatgtactggcggtaactcccagttacgaa
acacttcaaaaaatttccacattgttagagaataacatatcagtaattgttgaaaacaag
gatacgacaatagaagacattgagaaagccataaagaggggaaagacgctaattatgggg
gtagcacgagggaaattttcggagggaatagagtttaccgaaaacaggagaagcctaata
acggatatagcaatagtaggcattccctatccatcaacagatgacttcgctaaggcgaaa
atagaaactattagtaaaagagttaatggtgacgtcagagaactcctgttttcgattcca
gcacttgttgcagtgaggcaaattataggaagggcaataagaaacgaattcgattcgcct
aatatatggttattggataaaagatttgatagtgagtggtggaagaacaaattaggggca
tttaatgcaaagaaaataagattatga
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