KEGG   Sulfolobales archaeon HS-7: HS7_06240
Entry
HS7_06240         CDS       T08110                                 
Name
(GenBank) RNA-binding protein
  KO
K07573  exosome complex component CSL4
Organism
sahs  Sulfolobales archaeon HS-7
Pathway
sahs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sahs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HS7_06240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sahs03019]
    HS7_06240
Messenger RNA biogenesis [BR:sahs03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     HS7_06240
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     HS7_06240
SSDB
Motif
Pfam: ECR1_N Zn_ribbon_3 Auto_anti-p27 FtrD-like DUF7479 RUBY_RBDX Cas12f1-like_TNB Prok-RING_1
Other DBs
NCBI-ProteinID: BCU67187
UniProt: A0A8D5ZFZ7
LinkDB
Position
659528..660109
AA seq 193 aa
MADNEIVLPSQRLATEEEFMPGDNTYVINGEVRASQVGKAFFDMINRKVNVISPKKSGVI
LLKNAKTATGEVVEVRDDMAYVEIFMLDEKEISGTISAILPFAYTKEKGIESIKEAVRIG
DIIRGKPLNKNIPVILTIKQKEFGVIFARCSICGTVLLREENVLKCGNCGNIEKRKLGVY
MVKRNGTKSQRKE
NT seq 582 nt   +upstreamnt  +downstreamnt
atggcagataacgagatagttctgccttctcaaaggcttgcaacagaagaggagttcatg
cctggagataatacctacgttatcaacggagaagtcagagcatcacaagtcggtaaggca
ttcttcgacatgataaacaggaaagtaaacgtaatatctcctaagaaaagtggtgttata
ctactaaaaaatgctaagacagctacgggggaagttgttgaagtaagggatgacatggca
tacgtcgagatctttatgttagacgagaaggagatatcagggacaatatctgcaattctc
cccttcgcttatactaaggaaaaggggatagagagcataaaggaagctgtaagaataggt
gatataattaggggaaaaccccttaacaaaaacattccggtaatacttaccattaaacag
aaggaatttggcgttatattcgccaggtgctcaatttgcggcacggtcttgctaagggag
gaaaatgttcttaaatgtggaaactgcggtaatatagagaagagaaagctaggagtctat
atggtgaagaggaatggaactaaaagtcagagaaaggagtaa

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