Sulfolobales archaeon HS-7: HS7_08000
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Entry
HS7_08000 CDS
T08110
Name
(GenBank) exosome complex exonuclease Rrp41
KO
K11600
exosome complex component RRP41
Organism
sahs
Sulfolobales archaeon HS-7
Pathway
sahs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sahs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HS7_08000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sahs03019
]
HS7_08000
Messenger RNA biogenesis [BR:
sahs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
HS7_08000
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
HS7_08000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
FinO_N
Motif
Other DBs
NCBI-ProteinID:
BCU67363
LinkDB
All DBs
Position
820656..821378
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AA seq
240 aa
AA seq
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MQKPKLILDDGKRTDGRAPEELRKTIFEVGILKNADGSALVQAGNTKVIAAAYGPKEMHP
KHLALPDRAVLKVRYHMAPFSTDDRKSPAPSRREIEISKVIRETLEGSVLLELFPRAEID
VFAEVIQADAGTRLASLMACSLALVDAGIPVKDMIAAVAVGKADGLLVLDLNEAEDMWGE
ADMPVAVMPSLNQIVLLQLNGSMTREEYRKGLELAIKGIQQLYAMEKEVIRNKYIEYKEE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacctaaattaatacttgatgatggaaagcgtacggatgggagagcaccggag
gaacttaggaaaaccatctttgaagtaggtatattaaaaaacgctgacggctcggcgtta
gttcaggccggtaatactaaggtaattgctgcggcctatggtcctaaggaaatgcatcct
aaacatttagcacttccagatagggcagtattaaaagtaaggtatcatatggcacccttt
tctactgatgataggaagagtccagcaccgtcaagaagggaaattgaaatttcaaaagtc
ataagggagacattagagggaagtgttctacttgaactttttccccgagcagagatagat
gtttttgcagaggttattcaggctgatgcagggacgcggttagcgtcgttaatggcatgt
tctcttgctctagtagatgcgggtattcctgtgaaagatatgatagcagcggtagccgta
ggtaaagcagatggattattagtattggatttaaacgaagctgaagatatgtggggagag
gcggacatgcctgtagcagtcatgccatctttaaatcaaatcgtgttattacagcttaat
gggagcatgaccagggaagagtataggaaagggcttgaattggctatcaagggtatacaa
caattatatgcgatggaaaaggaagttataagaaacaaatatatagaatataaggaggag
taa
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