Salinicoccus sp. HZC-1: ACKRAT_13945
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Entry
ACKRAT_13945 CDS
T11407
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
sahz Salinicoccus sp. HZC-1
Pathway
sahz00750
Vitamin B6 metabolism
sahz01100
Metabolic pathways
sahz01240
Biosynthesis of cofactors
Module
sahz_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
sahz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
ACKRAT_13945 (pdxS)
Enzymes [BR:
sahz01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
ACKRAT_13945 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
FMN_dh
IGPS
IMPDH
TMP-TENI
PcrB
TIM
DUF2795
Trp_syntA
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
XMO21301
LinkDB
All DBs
Position
complement(2694791..2695675)
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AA seq
294 aa
AA seq
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MQQTGTERVKRGMAEMQKGGVIMDVVNAEQAKVAEAAGAVAVMALERVPSDIRAAGGVAR
ACDPRIVEEVVNAVSIPVMAKCRIGHITEARVLESLGVDYIDESEVLTPADEVFHLKKDE
YTVPFVCGCRNIGEAARRIGEGASMLRTKGEPGTGNIVEAVRHLRLVNQEVRQISVMSDD
ELMTEAKNHGAPYDVLKEIKELGKLPVVNFAAGGVATPQDAALMMELGADGVFVGSGVFK
SENPEKFAKAIVEATTHYQDYELIGRLAKELGTAMKGIDINQLSLEERMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagacaggtacagaaagagttaaaagaggaatggcggaaatgcaaaagggtggc
gtaatcatggatgtggtcaatgccgagcaggcgaaagttgcagaagcagcaggggcagtc
gctgtgatggcacttgaacgtgtgccgtccgacatcagggcagcaggcggtgtcgcaagg
gcatgtgatccaagaatcgttgaggaagtcgtcaatgcggtatcaattccggtaatggca
aaatgcagaatcggccatattacagaagcgagggtattggaatctctcggagtggactat
atagatgaatctgaagtgcttacaccggcagatgaagtattccacctgaagaaagatgaa
tatacagttccattcgtatgcgggtgccgtaacatcggcgaagcggcaagacgtatcgga
gaaggcgcatccatgctgagaacaaaaggggaaccgggcaccggcaatatcgttgaggca
gtcagacacctgagactggtcaatcaggaagtacgtcagatttcagtaatgagtgatgat
gaactgatgactgaagcaaaaaaccatggcgcaccgtatgatgtactgaaagaaataaaa
gaactgggcaaactgccggtagtcaacttcgcagcaggcggcgttgcaacaccgcaggat
gcggcacttatgatggaactcggcgcagacggtgtatttgtcggatcaggtgtattcaaa
tcagagaatcctgagaaatttgccaaagcgatcgtagaagcgacaacacactaccaggac
tacgaattaatcggcagactcgcaaaagagctcggcactgcaatgaaaggcatcgatatc
aaccagctttcattagaagaaagaatgcaggagcgcggatggtaa
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