Sulfolobus acidocaldarius DSM 639: Saci_0692
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Entry
Saci_0692 CDS
T00251
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
sai
Sulfolobus acidocaldarius DSM 639
Pathway
sai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Saci_0692 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sai03021
]
Saci_0692 (rpoA1)
Enzymes [BR:
sai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Saci_0692 (rpoA1)
Transcription machinery [BR:
sai03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Saci_0692 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HMBD
Motif
Other DBs
NCBI-ProteinID:
AAY80072
UniProt:
P11512
Structure
PDB
LinkDB
All DBs
Position
complement(548014..550656)
Genome browser
AA seq
880 aa
AA seq
DB search
MSEKIIRGVKFGVLSPNEIRQMSVTAIITSEVYDEDGTPIEGGVMDPKLGVIEPGQKCPV
CGNTLAGCPGHFGHIELIKPVIHIGYVKHIYDFLRSTCWRCGRIKIKEQDLERYKRIYNA
IKLRWPSAARRLVEYIKKISIKNLECPHCGEKQFKIKLEKPYNFNEERNGSIVKLSPSEI
RDRLERIPDSDVELLGYDPKSSRPEWMILTVLPVPPITIRPSITIESGIRAEDDLTHKLV
DIIRLNERLKESIEAGAPQLIIEDLWDLLQYHVATYFDNEIPGLPPAKHRSGRPLRTLAQ
RLKGKEGRFRGNLSGKRVDFSARTVISPDPNLSIDEVGIPYTIARMLTVPERVTNINIER
IRQYIINGPDKWPGANYVIKPDGRRIDLRYVKDRKELASSITAGYVVERHLVDGDVVLFN
RQPSLHRISMMAHKVRVLPGRTFRLNLLDCPPYNADFDGDEMNLHVPQSEEAIAEARELM
LVHKNIITPRYGGPIIGGGQDYISGAYLLSVKTTLLTVEEVATILGVTDFVGELGEPAIL
APKPYYTGKQVISLFLPKDFNFHGPANISKGPRACKDEICPHDSFIVIKNGLLLEGVFDK
KAIGNQQPESMLHWSIREYGTEYGKWLMDNVFKMFIRFLEMRGFTMTLEDITIPDEAQNE
ITTKIKEGYSQVDEYIRKFNEGQLEPIPGRTIEESLESYILDTLDKLRKVAGEIATKYLD
PFNNVYIMAITGARGSELNITQMTALLGQQSVRGERIRRGYRERTLSLFKYGDIAPEARG
FVKNSFMRGLSPYEMFFHAAGGREGLVDTAVKTSQSGYMQRRLINALSDLRIEYDGTVRS
LYGDIVQVVYGDDAVHPMYSAHSKSVNVNRVIERVIGWKR
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaagattatacggggcgtaaaatttggtgtattatcacctaatgaaataagg
caaatgtcagttacagcaataataacttcagaggtatatgatgaagacggtactccaatc
gaaggaggagtaatggatccaaaactaggtgtaatagagcccggtcaaaaatgtcccgta
tgtggtaacacgttagcaggttgtcctggtcatttcggccatatagaacttattaaacca
gtcattcacataggttatgttaaacacatttatgatttcctcaggagtacctgttggaga
tgtggtagaataaagattaaggagcaagatttagagagatataagagaatatataatgct
ataaagctcagatggccatctgcagcaagaaggttagtagagtatataaagaaaatatct
attaagaacctagaatgtcctcattgcggtgaaaaacaattcaagataaaattagaaaaa
ccatataatttcaatgaggaaaggaatggatcaatagtgaaattatccccctcagagata
agagatagattagaaagaatacctgacagtgacgttgagcttttaggatatgatcctaaa
tcctctagacctgagtggatgattttaactgttttaccagtccccccaataaccattagg
ccctctataactatcgaaagtggaataagagccgaggatgatcttactcataagcttgtt
gatataataaggcttaatgaaagattaaaagaaagtattgaggcaggtgctccacaatta
ataatagaggatttatgggatttattgcaatatcatgtcgctacttactttgataatgag
atacccggcttgcctccagccaagcatagatccggaagacctttaaggacacttgctcag
agactgaaaggtaaagagggtagatttagggggaacttatcaggcaagagagttgatttc
tccgcaagaactgtaatatctccagaccccaatttgagtatagatgaagtaggaattcca
tataccatagcgagaatgttaactgtaccggaaagggtaactaatataaacatagaaaga
ataaggcaatacattataaacggtcccgataaatggccaggagcgaattatgtaataaaa
cctgatggtagaaggattgatctaaggtatgttaaagatagaaaagaattagcttctagt
ataactgcaggatatgtagttgagagacacttagtagatggagatgtggtgctttttaat
agacagccttcattgcacaggatctcgatgatggcccacaaagttagggtattaccaggt
agaacattcagattaaatctgttagattgtcctccatataacgctgactttgatggagac
gaaatgaatctacatgttccacaatcagaggaagctatagcagaggcaagggaattgatg
ttagtgcataaaaacattattactcctagatacggcggacccatcataggtgggggacag
gattatataagtggtgcttatttgttatcagtaaaaactactctactaacagttgaagaa
gtggctactatattgggagtaacagactttgtaggagagctaggagaaccggctatactt
gctccaaagccatattacaccggaaaacaggtaatcagtctatttttgcctaaagatttt
aacttccatggtcctgctaatatatcaaaaggacctagagcatgtaaggatgagatttgt
cctcatgactcgtttatcgtcatcaaaaatggactattgttagaaggtgtatttgataag
aaagcaataggaaatcaacagccagaaagtatgttgcattggtctattagagaatacggt
accgaatatggtaaatggttaatggataatgtgtttaagatgttcattaggtttttagag
atgagaggtttcactatgactttggaggatataactataccagatgaagctcaaaatgaa
ataactactaaaattaaagagggatatagtcaggttgatgagtatataaggaaatttaat
gaaggacagcttgaaccaatacctggaagaacaattgaagaaagcctagaaagttatata
cttgatacactagataaactgagaaaagtagcaggagaaatagctacaaaatacttggat
ccatttaacaatgtatacattatggccataactggtgctagaggaagtgagttgaatata
acccagatgaccgctttattaggacagcaatcagtgaggggagagagaattagaagagga
tatagagagaggacattatctttgtttaaatatggtgacatagcacctgaagcaagaggt
ttcgttaagaactccttcatgaggggtctaagcccatatgaaatgttcttccatgcagca
ggaggtagagagggattagttgatactgctgtaaagacgtcacaaagcggttacatgcag
aggaggttaattaacgctttatcagatctaaggatagaatatgatggaactgtgagaagt
ttatatggagatattgttcaagtagtatatggtgatgatgcagtgcatcccatgtatagt
gcccatagtaaaagtgtgaatgttaacagagttatagaaagagttattggttggaagagg
tga
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