Sulfolobus acidocaldarius DSM 639: Saci_0693
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Entry
Saci_0693 CDS
T00251
Symbol
rpoB
Name
(GenBank) DNA directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
sai
Sulfolobus acidocaldarius DSM 639
Pathway
sai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Saci_0693 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sai03021
]
Saci_0693 (rpoB)
Enzymes [BR:
sai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Saci_0693 (rpoB)
Transcription machinery [BR:
sai03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Saci_0693 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
AAY80073
UniProt:
P11513
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(550649..554029)
Genome browser
AA seq
1126 aa
AA seq
DB search
MLDTESRWAIAESFFKTRGLVRQHLDSFNDFLRNKLQQVIYEQGEIVTEVPGLKIKLGKI
RYEKPSIRETDKGPMREITPMEARLRNLTYSSPIFLSMIPVENNIEGEPIEIYIGDLPIM
LKSVADPTSNLPIDKLIEIGEDPKDPGGYFIVNGSEKVIIAQEDLATNRVLVDYGKSGSN
ITHVAKVTSSAAGYRVQVMIERLKDSTIQISFATVPGRIPFAIIMRALGFVTDRDIVYAV
SLDPQIQNELLPSLEQASSITSAEEALDFIGNRVAIGQKRENRIQKAEQVIDKYFLPHLG
TSPEDRKKKGYYLASAVNKILELYLGRREPDDKDHYANKRVRLAGDLFTSLFRVAFKAFV
KDLVYQLEKSKVRGRRLSLTALVRADIITERIRHALATGNWVGGRTGVSQLLDRTNWLSM
LSHLRRVVSSLARGQPNFEARDLHGTQWGRMCPFETPEGPNSGLVKNLALLAQVSVGINE
SVVERVAYELGVVSVEDVIRRISEQNEDVEKYMSWSKVYLNGRLLGYYEDGKELAKKIRE
SRRQGKLSDEVNVAYIATDYLNEVHINCDAGRVRRPLIIVNNGTPLVDTEDIKKLKNGEI
TFDDLVKQGKIEFIDAEEEENAYVALNPQDLTPDHTHLEIWPSAILGIIASIIPYPEHNQ
SPRNTYQSAMAKQSLGLYASNYQIRTDTRAHLLHYPQMPLVQTRMLGVIGYNDRPAGANA
ILAIMSYTGYNMEDSIIMNKSSIERGMYRSTFFRLYSTEEVKYPGGQEDKIVTPEAGVKG
YKGKDYYRLLEDNGVVSPEVEVKGGDVLIGKVSPPRFLQEFKELSPEQAKRDTSIVTRHG
ENGIVDLVLITETLEGNKLVKVRVRDLRIPEIGDKFATRHGQKGVVGILIDQVDMPYTAK
GIVPDIILNPHALPSRMTIGQIMEAIGGKYAALSGKPVDATPFLETPKLQEMQKEILKLG
HLPDSTEVVYDGRTGQKLKSRILFGIVYYQKLHHMVADKMHARARGPVQILTRQPTEGRA
REGGLRFGEMERDCLIGFGTAMLIKDRLLDNSDKAVVYICDQCGYVGWYDRSKNRYVCPV
HGDKSVLHPVTVSYAFKLLIQELMSMVISPRLILGEKVNLGGASNE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgttagatacagagtctaggtgggcaatagctgaatcattctttaagacaagaggatta
gttaggcagcatttagattcattcaatgattttctgagaaataaacttcagcaagtaata
tatgaacaaggagaaatagtaactgaagttcctggattgaagattaaattaggtaaaata
agatatgaaaaacctagcataagagaaactgacaaaggacctatgagagaaataacacct
atggaggcaaggcttaggaatctgacctactcatctcctatatttttgagtatgattcca
gttgagaataatatagaaggcgaaccaatagaaatatacattggagatctccctataatg
cttaaatcagtagcagatccaacttcaaatttacccattgataaactaattgaaataggc
gaagaccctaaagatccgggtggttacttcatagtaaatggtagtgagaaagtgattata
gctcaagaagatctagcaacaaatagagtattagtagattatggaaagagcggatctaat
ataacacatgttgccaaagtaacatcctctgcagccggatatagagttcaggttatgata
gagagactgaaggatagtacaattcaaatttcatttgcaacagttccaggaagaatacca
tttgcaataataatgagagcattaggttttgtaacagatcgtgatatagtatatgcagta
tctttagaccctcaaattcagaatgaattactaccatcattagagcaggcaagctctatt
acaagtgcagaagaagcattggatttcataggtaatagagttgcaataggacagaaaaga
gaaaatagaattcaaaaagcggagcaagtaatagataaatatttcctacctcatcttggt
acatcacctgaagataggaaaaagaaaggatattatttagctagtgctgtaaataagatc
cttgaattatatttaggcaggagagagccagatgacaaagatcattatgcaaataagaga
gttagactagcaggagacttgttcacaagtttatttagagtagctttcaaagcctttgtt
aaagatctagtttatcagcttgaaaaatcaaaagtgaggggaagaagactttctttaacc
gccttagttagggctgatataataacggaaagaatacgacatgcattagcaacaggaaac
tgggttggcggtagaactggagtaagtcaattactagatagaacaaattggctatccatg
ttaagtcatcttaggagagtagtttcatctttagccaggggacagcctaattttgaggcg
agagaccttcatggaactcaatggggaagaatgtgcccgtttgaaacacctgaaggtcct
aacagtggacttgtgaaaaatctagccttgttagcacaggtttctgttggtattaacgag
tcagtagtcgagagggtagcttatgaattaggagtcgtgagtgtagaagatgtaataagg
agaatcagtgagcaaaacgaagacgtggaaaaatatatgagttggagtaaggtttacctt
aatggtagattattaggatattacgaggatggtaaagagttagctaagaagattagggaa
tcaagaaggcagggaaagctcagtgatgaagtaaatgtagcatatatagccacagactat
ttgaatgaagttcacataaactgtgatgcaggaagagttagaagacctttaattattgta
aataatggtactcctttagtggatactgaagacattaagaaattgaagaatggagaaata
actttcgatgacctagtcaaacaaggtaaaatagaatttatagatgccgaagaggaggaa
aatgcatatgttgctttaaatccacaagatctaacaccagatcatactcatttggaaata
tggccgtctgctatattgggtattattgcatccattataccctaccctgaacataaccag
tctcccagaaatacttaccaatcagctatggctaaacagtctttgggtctttatgcgtcg
aactatcaaataagaactgatacaagagcccatttattacattatccacaaatgccccta
gtgcagacaagaatgttaggagttataggctataatgatagaccagcaggtgctaatgca
attctagctatcatgtcttatacaggatataatatggaggactcaataattatgaataag
tcctccatagagaggggaatgtataggtcaacgttcttcaggctttattccacggaagaa
gtaaaatatccaggaggacaagaagataaaatagttacaccagaagctggtgtaaaaggc
tataaaggaaaagattattacagactcctagaagataatggagtggtttctccagaagtt
gaggtaaaaggaggagatgtcttaataggtaaagttagccctcctagattccttcaggaa
ttcaaggagttaagtcctgagcaggctaaaagagatacatcaatagtcacaagacacgga
gaaaatggtattgtggatttagtgttaataacagaaactcttgaaggtaataaattagta
aaagtaagggtaagggatcttaggattcctgaaataggggataagttcgctacaagacat
ggtcaaaaaggagtagttggtatattaattgatcaagttgatatgccatataccgcgaaa
ggtatagttccagatataattttgaatccacatgctttgccctcaagaatgactatagga
caaataatggaggcgataggtggtaaatatgcagctttatcaggtaaacctgtagacgca
actccattcttagagacaccaaaactacaagagatgcaaaaggaaatacttaaattagga
cacttaccagattcgacggaagtagtatatgatggaagaacaggtcaaaaattgaaaagc
agaatattgtttgggatagtatactatcaaaagttacatcacatggttgcagataaaatg
catgcaagagcaagaggaccagttcaaattttaaccagacaacctactgaaggcagagct
agggaaggtggattaagattcggagaaatggagagagactgtttaattgggtttggtact
gcgatgttaattaaagatagattgctagataattcagataaagctgtagtatatatctgt
gatcaatgtggatatgtgggctggtacgatagaagcaagaatagatacgtgtgcccagtg
catggcgataaatctgtcttacatccagttactgtttcatacgcgtttaaacttttaatt
caagaacttatgagtatggtaatttcaccgagattaattttaggtgaaaaagtaaactta
ggaggtgcttcaaatgagtga
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