KEGG   Salinarchaeum sp. IM2453: K0C01_00480
Entry
K0C01_00480       CDS       T07444                                 
Symbol
tfe
Name
(GenBank) transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
saim  Salinarchaeum sp. IM2453
Pathway
saim03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:saim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    K0C01_00480 (tfe)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:saim03021]
    K0C01_00480 (tfe)
Transcription machinery [BR:saim03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     K0C01_00480 (tfe)
 Prokaryotic type
  Archaeal type
    TFE
     K0C01_00480 (tfe)
SSDB
Motif
Pfam: TFIIE_alpha Sigma70_r3 DNA_ligase_ZBD Zn_ribbon_3 Rad50_zn_hook HU-CCDC81_bac_2 Zn_ribbon_TFIIB DUF4164
Other DBs
NCBI-ProteinID: QZA88686
UniProt: A0A8G1H7B9
LinkDB
Position
complement(100208..100738)
AA seq 176 aa
MAFEELLEDPVIQKYLHELVGPQGMQVAAAPPDGEVTDEELAQQLDMELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYEKIPQNLEEEMERLEQALDERRDYEVQNEFYLCE
IDSIRFEFDEAMEFGFECPECGSPLEPMDNEQLISAIDERISELRNELNISKDTDN
NT seq 531 nt   +upstreamnt  +downstreamnt
atggcttttgaggaacttctggaggatcctgtaattcaaaagtacctgcatgagttggtt
ggaccgcagggaatgcaagttgctgctgctccgccggacggagaagtaaccgacgaagaa
cttgctcagcaacttgatatggaattgaacgatgttcgccgcgccctttttattctctat
gagaatgatctcgcatcataccgccgacttcgggatgaagactctggatggctaacatat
ctctggacatttgaatatgagaagattccacagaacttagaggaagaaatggagcgtctt
gaacaggcccttgacgaacgccgtgactacgaagtgcaaaatgaattctacctttgtgaa
atcgattcaattcgatttgaattcgacgaggcaatggaatttggctttgagtgcccggaa
tgtggatcgccacttgagccgatggacaacgaacagctgattagcgccattgatgagcgc
atctccgaactgcgaaatgagctaaacatatctaaggatacagataactga

DBGET integrated database retrieval system