Salinarchaeum sp. IM2453: K0C01_00480
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Entry
K0C01_00480 CDS
T07444
Symbol
tfe
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K0C01_00480 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saim03021
]
K0C01_00480 (tfe)
Transcription machinery [BR:
saim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
K0C01_00480 (tfe)
Prokaryotic type
Archaeal type
TFE
K0C01_00480 (tfe)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DNA_ligase_ZBD
Zn_ribbon_3
Rad50_zn_hook
HU-CCDC81_bac_2
Zn_ribbon_TFIIB
DUF4164
Motif
Other DBs
NCBI-ProteinID:
QZA88686
UniProt:
A0A8G1H7B9
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All DBs
Position
complement(100208..100738)
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AA seq
176 aa
AA seq
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MAFEELLEDPVIQKYLHELVGPQGMQVAAAPPDGEVTDEELAQQLDMELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYEKIPQNLEEEMERLEQALDERRDYEVQNEFYLCE
IDSIRFEFDEAMEFGFECPECGSPLEPMDNEQLISAIDERISELRNELNISKDTDN
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggaacttctggaggatcctgtaattcaaaagtacctgcatgagttggtt
ggaccgcagggaatgcaagttgctgctgctccgccggacggagaagtaaccgacgaagaa
cttgctcagcaacttgatatggaattgaacgatgttcgccgcgccctttttattctctat
gagaatgatctcgcatcataccgccgacttcgggatgaagactctggatggctaacatat
ctctggacatttgaatatgagaagattccacagaacttagaggaagaaatggagcgtctt
gaacaggcccttgacgaacgccgtgactacgaagtgcaaaatgaattctacctttgtgaa
atcgattcaattcgatttgaattcgacgaggcaatggaatttggctttgagtgcccggaa
tgtggatcgccacttgagccgatggacaacgaacagctgattagcgccattgatgagcgc
atctccgaactgcgaaatgagctaaacatatctaaggatacagataactga
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