Salinarchaeum sp. IM2453: K0C01_00520
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Entry
K0C01_00520 CDS
T07444
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
saim
Salinarchaeum sp. IM2453
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saim03000
]
K0C01_00520
Transcription factors [BR:
saim03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0C01_00520
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
Sigma70_r4
HTH_20
Sigma70_r4_2
GAF_3
GAF_2
GerE
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QZA88693
UniProt:
A0A8G1M3Y2
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Position
complement(108598..110310)
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AA seq
570 aa
AA seq
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MTNSSRRPLTTGDYTALRDAAVTHRAALIIRLAGEVGLTTSEIPTICPADIERVQATPPQ
FVLHVNGRTAYLPTSLRREIERYANSGGIDEDQPLIDISSRRVQMILDETADRAAKQTGK
RSLSAVTGQTLRQYFAYSALFDEQIPFRVLCSVGGWEINGPLSEYLPSVDTEEIVSAFAN
NETTAAAASEGTKTLTHAMQQVIDTTSNSKLTEKVCETIAEKEAYIGAYFARWGPKYSSI
HVQTADGIGLQDARRSASSIDENIREAILKSSSVHLATPVSQIADQITTDQVIFVPVHLN
ERPSGVMAVFPVEGRTIPSHEQDQLALFGQQIARTISDNRRQALIESDAVTELEFACQSP
NAPLIQLSRELTCPVELESLIRVDDAEFICFVSIECADPSVVVRSTEDLSNIQEYRLIER
GTESVSFELTITGTSPISVLLDAGGNIDSVSIDDNTAQLVVHYPEGTDVRSITNDLRSHF
PETELAGKRTRERPSSITQPVDRSINSELDERQQDVLQAAFFGGYFDWPRGSTAEEIADS
LDISSPTFHKHLRQGLHRLLSVALDSENTN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgacgaactcatctcgacgacctctcactaccggagactatacagcattacgtgatgct
gctgttactcatcgcgctgctcttattatccgccttgctggagaggttggacttacaact
tctgagattcccactatctgtcctgcggatatcgaacgtgttcaagcaaccccgcctcaa
tttgtgctgcacgttaatggccgaactgcctatctgccaacttctctacgacgtgaaatt
gaacgctatgccaacagcggaggcattgacgaggaccagccactgatcgatatttcttcc
cgaagagtacagatgattcttgatgaaactgctgacagagctgcaaaacaaactggcaag
cggtctctctctgcagttactggacagactctccgtcagtattttgcttactctgctctc
ttcgatgagcaaatcccattccgggttctgtgttcggtcggtggatgggaaattaatgga
cctctttctgagtaccttccttcagtagatactgaggagatcgtctctgcatttgctaat
aatgagaccacagcagccgctgcctctgaaggcacgaagacactcacccatgcaatgcaa
caagtgatcgacactacatctaactctaaactgactgaaaaagtgtgcgagacgattgct
gagaaagaagcctatatcggagcttactttgcacgatgggggcccaaatactcgtctatt
cacgtccaaaccgctgatgggatcggtctacaagatgcgcgacgctctgcctcttccatt
gatgaaaacatcagagaagcaattttaaaatcttcatctgtgcacttggcaactccggta
tctcaaatcgcagatcaaattaccaccgatcaggtcatttttgtccctgttcatttaaac
gaacgtccgtctggtgtcatggctgtattccctgttgaggggagaacaataccttcacat
gagcaggatcaattggcactctttgggcaacaaattgcacgaactatttcagacaaccgg
cgacaggcactcatcgaatccgatgctgttactgaactcgaatttgcttgccaaagtcca
aatgcccctctcatccaacttagtcgtgaactcacctgtcctgtggaacttgagtcatta
attcgcgttgatgacgccgaatttatttgttttgtttctattgagtgtgcagatccttct
gttgtcgtaaggagcactgaagacctctccaatatccaggaatatcggcttattgaacga
ggcacagagtctgtatcttttgaattaaccatcacgggtacctctcctatttcagtacta
ttggatgctggaggtaacattgactctgtatcaattgacgacaatacggcccagcttgta
gttcactaccctgaggggacagatgttcgttcaatcaccaatgaccttcgatcccacttt
ccagaaactgaacttgctggaaaacgtactcgggagagaccttcttctattactcaaccg
gtagaccgatcaataaacagtgaacttgatgaacgacaacaagatgttttgcaggcagca
ttctttggtggttacttcgactggccacgtggtagtacagctgaagagattgctgactcg
cttgatatttcatctccaacgtttcacaagcatctgcgccagggattacatcggctgtta
tctgtcgctcttgactccgagaatacgaattaa
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