Salinarchaeum sp. IM2453: K0C01_01195
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Entry
K0C01_01195 CDS
T07444
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim03420
Nucleotide excision repair
saim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K0C01_01195
03430 Mismatch repair
K0C01_01195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saim03400
]
K0C01_01195
Enzymes [BR:
saim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0C01_01195
DNA repair and recombination proteins [BR:
saim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0C01_01195
MMR (mismatch excision repair)
Other MMR factors
K0C01_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_11
AAA_22
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
QZA88811
UniProt:
A0A8G1H7R0
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All DBs
Position
complement(254797..256647)
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AA seq
616 aa
AA seq
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MSTSEPSITRLFGGPGSGKTTALLDRVEKILDENDDVTVRDILVVSYTRAAAAEIRERLA
ERLDCSPRSLQGNVCTMHSKAYELLNLSRNDVVSESDKEEFCEEFGIEYEDEHGGASRRT
ARSTTLGNKVIATSQWLQRTRRDVADWYDVPFQWDVEKVRLPPEKDPNAQDGNKYTPTWP
SDDDRVDVPEAIRAWRVYKGDHDLIGFADMLERVKQRSLVPNVDYLIIDEFQDITTLQYD
VYEEWKPYIKRVLIAGDDDQVVYSWQGADPNLLLDEDVTEDVILPNSYRLPSNVLEVVNQ
EISHIDKRQEKDLNPRKEGGLVEAMRSPSMLDVVREVRQTILDTDETVMLLFRARYQMFQ
FIDEFIDEGFPFQIMTDQRMWTDRLSQFVNAIEAIDANEPIDGLQARRLADMLADAAFGT
NDRDDLFDVIDERLEDADTDDLTEITIEPELITDHAPFMPGPKSAADMSRKITSFQAESM
DAYFRLNRGSIPRDRIRVGTIHSAKGREADHVLMATDLTEKVVEQMAATVEDPTDVPGVD
EFTKSTSPVPTLTDNERRVFYVGMSRARERLVLAENLISGAPTLPLDVLLWNEPQRSDDA
DVLNTHGTVELTSHND
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcggagccgtcgataactcgcctctttggggggccgggaagtgggaaaacg
acagcgttgcttgatcgtgtcgagaaaatactcgatgaaaacgatgatgtaactgttcgc
gatatccttgtagtctcatatactcgtgctgcggcagcagaaatccgtgagcgtcttgct
gagcgtctcgattgctcgccacggtctctacagggaaatgtctgtacgatgcactcaaaa
gcgtatgaacttcttaacttgtcccgaaatgatgttgtttcagaatcggataaagaagag
ttctgtgaagaatttggtatcgagtatgaggacgaacatggaggagctagtcgtcgaacc
gcccgatcaacaacattgggtaacaaagtcatcgcaacaagccagtggttacagcggacc
cggagagatgtagccgactggtatgatgttccatttcagtgggacgttgaaaaagtccgt
ttacctcctgaaaaagaccctaacgcacaggacggaaacaaatacactccaacgtggcca
agtgatgatgatcgagttgatgttcctgaggcaattcgtgcgtggcgagtatacaaaggc
gatcacgacttgattggctttgctgacatgctcgaacgcgtaaaacaacgctcgctcgtt
cctaatgttgactatcttattattgacgaatttcaggatatcactacactacaatatgat
gtctacgaagagtggaaaccgtacatcaaacgtgtacttattgccggcgacgacgaccag
gtagtgtattcctggcagggtgctgatccaaacctacttctcgatgaggatgtgaccgaa
gatgtcattcttccgaactcatatcgtctcccttccaatgttcttgaagtggtaaaccag
gaaatttcccatatcgacaagcgacaggagaaagacctcaaccctcgtaaagagggcggg
ttggttgaagcaatgcggagcccgtcgatgcttgatgtcgtacgtgaggttaggcaaact
attttagataccgatgaaaccgttatgcttctgtttcgggctcgataccagatgttccag
tttatcgatgagtttatcgacgaaggatttccgttccaaataatgacagaccagcggatg
tggacggatcgcctttcacagtttgtcaacgcaatcgaagccatcgacgctaacgagccg
attgatggtctgcaggcacgacggctcgccgatatgctggccgatgctgcgtttggaacc
aacgatcgtgatgatttattcgatgtgatcgatgaacggcttgaagacgccgatactgat
gatctgacagaaattacgatcgaacctgagctgattacggaccatgctccattcatgccc
ggtccaaaatctgccgctgatatgtctcggaaaatcacatctttccaagctgaaagtatg
gatgcatatttccggcttaatcgaggttctattccccgtgatcgtattcgggttggtacc
attcactctgctaagggtcgtgaagcagatcatgtcctcatggcaactgatcttacagag
aaggttgttgaacaaatggcagcaactgtcgaggatccaactgatgtgcctggggttgat
gaatttaccaaatcaacaagtcccgttccgaccctcactgacaacgaacgtcgtgtcttc
tacgtcgggatgtctcgtgcccgagaacgtcttgtgctagctgagaatcttattagcggg
gctccaacccttccacttgatgtcttgctttggaatgaaccacaacgctccgatgatgcc
gatgtcctcaatacgcatggaactgttgagctgacttcgcataacgactaa
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