Salinarchaeum sp. IM2453: K0C01_01300
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Entry
K0C01_01300 CDS
T07444
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K0C01_01300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saim03021
]
K0C01_01300
Transcription machinery [BR:
saim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
K0C01_01300
Prokaryotic type
Archaeal type
TFB
K0C01_01300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Cas12f1-like_TNB
Trm112p
Zn_ribbon_tTFIIB
DZR
Zn_ribbon_TFIIB
Sigma70_r4
FtrD-like
Zn_ribbon_3
DUF8054_C
Motif
Other DBs
NCBI-ProteinID:
QZA88832
LinkDB
All DBs
Position
274095..275072
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AA seq
325 aa
AA seq
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MTRNPTRTRTDERTSEEQDESVDQCPECGGNLRSDEEHGETVCEECGLVIEADEIDHGPE
WRAFDAKEKDEKSRVGAPTTKMMHDEGLSTNIGWQDKDAYGRQLSSRQRQKMQRLRTWNE
RFRTRDSKERNLKQALGEIDRMASALGLPNNVRETASVIYRRALDEDLLPGRSIEGVATA
SLYAAARQAGTPRSLDEITEVSRVDKMELTRTYRYIVRELNLEVKPADPKQYVSRFISDL
SLSEEVDRTARDLLDQARDRGIHSGKSPVGLAAAAVYAASLLTNEKVTQNQVSEVADVSE
VTIRNRYKELLDAAEGDDPGTPAAV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtaatccaacccgaacgcgaacagacgaacgaacctcagaagaacaggatgag
agtgttgatcagtgtcctgaatgtggtggtaatctccgtagtgacgaagaacatggtgaa
accgtctgtgaagaatgcggtctcgtaatcgaagctgacgaaattgatcatggccccgaa
tggcgggcattcgacgcaaaggaaaaagacgaaaaatcacgtgtcggagcaccgacaaca
aagatgatgcacgatgaagggctttcaacgaacattggctggcaggacaaggatgcgtat
ggtcggcagttgagctcacgacagcgacagaagatgcaacggctccgaacatggaacgag
cggttccgtacccgtgactcaaaggaacgtaatctcaaacaggcattgggtgagatcgac
cgaatggcatccgcacttggtctcccaaacaatgttcgggagacagcgagtgtcatctac
cggcgtgcacttgacgaagatctccttccaggccgatcgattgaaggcgtagcaacggcg
tcattgtatgccgccgctcgacaagctggaacgccacgaagtctcgatgaaattaccgag
gtaagtcgtgtcgataaaatggagctcacacgaacgtaccgttatatcgttcgtgagttg
aacctcgaggtaaaaccagctgatccgaagcagtacgtgtcacggtttatctctgatctg
agcctttcagaagaggttgaccgtacagcacgagatctgcttgatcaagcacgggaccgc
ggtatccacagtggtaaatcgccagtcggccttgctgccgctgcagtgtacgcagcttcc
ctgctcacaaacgaaaaggtgacccagaaccaagtcagcgaagtagcagatgtatcagaa
gttacgattcgaaaccgatacaaagagctgcttgatgctgccgaaggtgatgaccctggt
acaccagcagccgtctga
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