Salinarchaeum sp. IM2453: K0C01_01980
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Entry
K0C01_01980 CDS
T07444
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
saim
Salinarchaeum sp. IM2453
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saim03000
]
K0C01_01980
Transcription factors [BR:
saim03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0C01_01980
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
HTH_10
PAS_9
PAS
GAF_2
PAS_3
PAS_8
FIVAR
PAS_4
GAF
PAS_13
Response_reg
ArlS_N
GAF_3
DUF134
Motif
Other DBs
NCBI-ProteinID:
QZA88958
UniProt:
A0A8G1H7U5
LinkDB
All DBs
Position
complement(404022..406052)
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AA seq
676 aa
AA seq
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MAKPRVLLVHDEGVDDAVEALLDVDGSVVTVEHVDSALEWMNQTEFDCIVSAGLDPEAGA
DDLLEYIRNQPRTPPYVFYTDEPTIDEVDPVTDDFLRAIKRDGPTSITQLRRIVNNILNG
DAPEHVDTTSSERLIEDPKEHAPTAEELAATLEDAPIGVTITDPTLSGNPIVYVNDAYED
LTGYDRAEVLGRDHTLLQGPETDPSDIATLEQAIENHESTSVEMLNYQADGSAFWNRVTV
TPLYNTDESAVKYWAYFQEDVSTRREAEQRAQRRASALHDEKRTLDDALSRVQTVFENVT
TAAMNASNVESLLSDVLGAIDAVDGYRGGWISTVNHQRGDPVAVVTDGNHPMSRSTRIRL
DTGGPIAEAYHSQDVITSTAPEITSDSIDPVSFDATTLVSVPLLYRNTVYGILGVYIDRA
LVGDEREISVMKSLGTLVGGSYNAVQTRRALHSDMRIELEFRICDSSLLLPNIAAALDTS
IQYKRLDAHVGDIPRLHLTVRDPPEDVKSLLTEINAIDTIASVIDHGDQAIVSVDVTRCP
IIEVVSDHGLEITDLEATAGEVHVELTALPETEIRRVVNILDDRFADVSLISQRKRSGST
RTPGEFISTVRDDLTDRQYAALETAYQAGYFEWPRPVEGEDLADSMGITRQTFHQHLRTA
QRKLISAFFPEQTSES
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccccgggttcttcttgttcacgatgagggagttgacgacgctgtcgaggca
ctcttggatgttgatggttctgttgtgaccgttgagcatgttgactctgcgctggagtgg
atgaatcaaactgagtttgattgcattgtcagtgcggggcttgatccagaggcaggtgct
gatgacctacttgaatatattagaaaccaaccacggacaccaccgtatgtcttctacacc
gatgaacccaccattgatgaggttgaccctgtaacggatgattttcttcgagcaatcaag
cgtgacggtccaacctcgataacacaactgcgacgtatagtcaataacattctcaatggt
gatgcccccgagcatgtggataccacctcttcagaacggttgattgaggatcccaaagaa
cacgctccgactgcagaggagcttgcagctacgcttgaggatgcaccgatcggtgtcacg
attactgatccgacactgtcaggcaacccaatagtgtacgtaaacgacgcatatgaggac
ctaacgggttacgatagggcagaggtcctcggccgcgatcatactcttctacaagggcct
gagaccgatccaagtgatattgcgacgcttgagcaagcaatcgagaatcatgaatcgaca
agcgttgaaatgctgaactatcaggccgatggaagtgccttctggaaccgtgttactgtt
acgccactatacaatacggatgaatctgcggttaaatactgggcttatttccaagaagat
gtcagtactcgtcgtgaggctgaacaacgtgcacagcgacgggcaagcgcgcttcatgat
gaaaaacggactctagatgacgctcttagtcgtgtccaaactgtcttcgagaacgtaaca
acagctgcaatgaacgccagcaatgttgaatcactactctctgatgtactcggggcaatt
gatgcggttgacggataccgtggcggctggatttcaacggtaaatcatcaacgtggtgac
cctgttgccgttgttaccgatggaaaccatccaatgtctcgttcgacacgtatccgactg
gatactggtggtccaatcgccgaagcataccactcacaagatgtaatcacctcaacagcc
ccagagatcacctctgattcaattgatcccgtttcattcgatgccacaacgcttgtttct
gttccgttgttgtatcggaacactgtatatggcattcttggcgtttacatagatcgtgca
cttgtcggcgatgaacgagagatctcggtcatgaaatcactcggaactcttgttggcggc
tcgtataatgctgttcagactcgccgagctctacacagcgacatgcgaattgaacttgaa
ttccggatatgtgactcatcactgttgttacctaacattgcagctgctctcgataccagt
attcagtacaaacggcttgatgcccacgtaggagatatccctcgtttgcatcttactgtc
cgtgaccctcctgaagatgtcaagtcattgctgaccgaaatcaatgcgatcgatactatt
gcatctgttattgaccatggtgatcaggcgattgtctcagttgatgttacacgatgcccg
attatcgaggttgtatctgaccatgggctagagattacagacttagaagcgacagctggt
gaggtgcatgttgaactcacagcactacctgaaacagagattcgccgtgtcgttaatatt
cttgatgatcgctttgccgatgtttcgctgatctcacagcgtaaacgaagtggtagtacc
cgcacgcctggtgagtttatctcgacagttcgcgacgacttgactgatcgacaatatgcg
gcattagaaactgcttatcaggccggttacttcgagtggccacgtcctgttgagggagag
gatctagccgattcaatgggaattacacgacagacgttccatcagcatcttcggacggca
cagcgaaagcttatttctgcattcttccctgagcaaacatctgagtcgtga
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