Salinarchaeum sp. IM2453: K0C01_03905
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Entry
K0C01_03905 CDS
T07444
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim03410
Base excision repair
saim03430
Mismatch repair
saim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0C01_03905
03430 Mismatch repair
K0C01_03905
03440 Homologous recombination
K0C01_03905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saim03400
]
K0C01_03905
DNA repair and recombination proteins [BR:
saim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K0C01_03905
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K0C01_03905
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K0C01_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
QZA89298
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All DBs
Position
837276..838688
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AA seq
470 aa
AA seq
DB search
MSGPVPELADRAARCAEAVMNADEVVVASHIDADGLTSAAVATETLKRCEIPHQVVFRKQ
LDGEGIKQISELGADTVLFTDFGSGQLRDIKKYAKDAFTPVVVDHHQPVDVEIQYHLNPL
LEGIDGAAELSGAGTTYVLSRALEDTEGANKDLAALAIVGAIGDRQLTNGTLTGANTAIV
EEGVQTGVLKTQTDLSLYGKQTRELPDLLAYAGDIRIPGITGDRNGTVQFLDGLDIEVRS
DESWKRWVDLSESSKKTLASALIQKAMTKGISTQKIDQLIGESYILSTEQEGTELRDASE
FSTLLNATARYERADVGLAVCLGDRDKAYEKSQRLLRNHRRNLSEGVTWVENTGVERENQ
CQWFHAQDNIKETIVGIVAGMALGVEGVSRDRPIIAFANKTDDTVKVSARATSELTGKGV
DLSEVMYEAANAVEGEGGGHTIAAGATIPSGTEETFLDVVERTLKRQREE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggccagttccggaattagctgatcgtgccgcgcgatgtgcagaggcagttatg
aatgcagacgaagttgttgttgcatcacatattgatgcagatgggttaacaagtgcagca
gttgccacagagacactgaaacgatgcgagattccgcatcaagtagtgttcagaaagcaa
ttagacggagaaggaatcaagcaaatctctgagctgggtgcagatacagtcctgtttact
gatttcgggagtggacaactccgtgacatcaaaaaatatgctaaggacgcatttaccccc
gtcgtcgtcgaccaccatcagcccgtggatgtagaaattcaatatcacctgaacccattg
cttgaaggaatcgatggagctgcagaattgtctggagcaggaacaacgtacgtactttcc
agagcattggaagacactgagggtgcgaataaggatttggctgcgcttgcaattgtcggc
gccatcggggatcgacagcttacgaatggtacactaaccggagcaaatacagcaattgtt
gaagagggagtacaaactggggtactgaagacacagacagatttgtcactgtacggaaaa
cagacacgagagttgccagatctattggcatatgcgggcgatattcggattccaggaatc
actggagacagaaatggaacagtccagtttcttgatgggcttgatattgaggtgcgatcc
gatgagtcctggaagcgttgggtcgatctttcagagtcctcgaagaagactcttgccagt
gcgctgatccagaaggcaatgacgaaagggatatcgactcaaaaaattgatcagttgatc
ggagagtcatatattctcagtaccgagcaagagggaacagaactacgggacgcaagtgaa
ttctcaacgttattgaacgcaacagcacggtacgaacgggcagatgtaggcttagccgtg
tgccttggagatcgcgacaaagcatatgagaagtcacaaaggctgctgcgaaatcaccgg
agaaatctctcagaaggggttacgtgggttgaaaacaccggggtcgagcgtgagaatcag
tgtcaatggttccacgcacaagacaatatcaaagaaaccattgttggaatcgttgcaggc
atggcgctcggagtagagggagtaagccgagacagaccaattattgcatttgcaaataag
acagacgatacggtcaaggtctctgcgcgggctacatcagaactaacggggaaaggagtc
gatctttctgaagtaatgtacgaagctgccaatgcagttgaaggagaaggaggaggacat
acaattgccgccggagcaacgataccgtctggaaccgaagagacatttctcgatgtagtg
gaaagaacactcaagcgacaacgggaagaatag
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