Salinarchaeum sp. IM2453: K0C01_03920
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Entry
K0C01_03920 CDS
T07444
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
saim
Salinarchaeum sp. IM2453
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saim03016
]
K0C01_03920 (thpR)
Enzymes [BR:
saim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
K0C01_03920 (thpR)
Transfer RNA biogenesis [BR:
saim03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
K0C01_03920 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
GhoS
Motif
Other DBs
NCBI-ProteinID:
QZA89753
UniProt:
A0A8G1H9B7
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All DBs
Position
complement(840351..840905)
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AA seq
184 aa
AA seq
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MRVFASIDLPESFVSDIEAVQSRIDSASGIKLTDPTQAHITLKFFGDVSSEKADDISSLI
SSAVSDAGTGSFDVSITKLGVFPSLDYISIVWLGVGDGANEITTLHEEIEKQAVNAGFDP
EDNDFTPHVTIARMKHAGGKESVQDMVRDKSPDIGSFNVDTIQLKESTLTQDGPVYSTIE
SFEL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgtttgctagtatcgatcttcccgagtcttttgtctctgacattgaagctgtt
caatcacgtatcgacagtgcttctggaatcaaactcactgatccaactcaagcacatatt
actctaaaattctttggtgatgtctcgtctgagaaagcagacgatatttctagtctgatt
tcctcggctgtttcagatgctggtactggttcatttgacgtgtctattaccaaattaggt
gtatttccctcccttgattatatcagcattgtttggcttggtgtcggcgatggtgctaat
gagataactacacttcacgaggaaattgaaaagcaagctgtcaatgccggatttgatcct
gaggataatgatttcacaccacacgtcacaattgcccgaatgaaacatgcaggcgggaaa
gagagtgtccaagatatggttcgggataagtcacctgatatagggtcgtttaacgtagat
accatccaactcaaggagtcaacactcacacaggacggcccggtgtattccacgattgaa
tcgtttgaattataa
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