Salinarchaeum sp. IM2453: K0C01_04560
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Entry
K0C01_04560 CDS
T07444
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
K0C01_04560 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saim03019
]
K0C01_04560 (prf1)
03012 Translation factors [BR:
saim03012
]
K0C01_04560 (prf1)
Messenger RNA biogenesis [BR:
saim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
K0C01_04560 (prf1)
Translation factors [BR:
saim03012
]
Eukaryotic type
Release factors
K0C01_04560 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_8
eIF-5_eIF-2B
DUF7130
Motif
Other DBs
NCBI-ProteinID:
QZA89416
UniProt:
A0A8G1M648
LinkDB
All DBs
Position
967295..968545
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AA seq
416 aa
AA seq
DB search
MTTQEAEEDSGRRKYEFRKVIEQLQEYEGSGTQLVSIYVPPDKRINEIVQHVTTEHSEAA
NIKSKQTRTNVQDALSSIKARLQYYDEPPENGMVLFSGAVDSGGGRTDMVTKVLENPPDP
IQSFRYHCDSHFLTEPLEHMLADKGLYGLVVLDRREANVGWLKGKRVEPVKSATSLVPGK
QRKGGQSAQRFARLRLEAIDNFYQEVAGMANELFVPKRHELDGVLIGGPSPTKEEFVDGD
YLHHELQEKVLGKFDVSYTDESGLYDLVDAAEEALADAEIMEDKRLMKEFFSELHGGELA
TYGFKPTRQNLIMGSVDTLLISEDLRKDVVVFECGECGNTDYELIDQRHDTPEHNCSECG
EPVTATTREDAIDHLINIADQRGTGTEFISTDFEKGEQLYNAFGGIAGILRYSTNV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactactcaggaggcagaagaagactcgggccgtcggaaatacgaattccggaaggtc
atcgagcagctacaggagtacgaagggtcaggaacacaacttgtctccatttacgttcca
ccagataaacgaattaatgaaattgttcagcatgttactacagagcacagtgaagcagcg
aatattaaatcaaagcaaactcggacaaacgtccaagatgcgctgtcttcaataaaagcg
cggttgcagtattatgacgagccaccggaaaatggaatggtattgttttcgggcgccgtg
gactcggggggcggacgaacagacatggtaacgaaggtgctggaaaacccaccagatccg
attcaatcattccggtatcactgtgactctcatttcctgacggaaccgcttgagcatatg
ctggctgataagggactgtatgggctcgttgtgcttgaccgacgagaagcaaacgtcgga
tggctcaaaggaaagcgtgttgagccggtcaagtcagcaacatcattggtacctggcaaa
cagcggaaaggaggccagtccgcacaacgattcgctcgattacgcttggaggctatcgat
aacttctatcaagaagtcgctgggatggcaaacgagttgttcgttcccaagcgtcacgaa
ctagatggtgtcttaattggcggaccttcgccgaccaaagaagaatttgtagatggagac
tatctacaccacgaacttcaggagaaagtacttggaaaatttgacgtttcgtacaccgat
gagtcgggactgtatgatcttgttgatgcagcagaggaggcactcgctgacgcagagatc
atggaggacaagcggttaatgaaggagtttttcagcgagttacacggaggagagctggcg
acatatggattcaaaccaacgcggcaaaacctgattatgggctcagtagacacactacta
atcagtgaggatttgcgcaaggatgtagttgtattcgagtgtggagaatgtggcaataca
gattacgaactcattgatcagcgtcacgatacaccagagcacaactgttcagagtgtggg
gagccagtcacagcaacaactcgggaagatgcaatagaccacttgattaatatagctgat
caacgtggaacgggtacggaatttatttcaactgacttcgagaaaggagagcaactgtac
aatgcgtttggtggaatagctggaatccttcgatactcaacaaacgtgtaa
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