Salinarchaeum sp. IM2453: K0C01_05945
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Entry
K0C01_05945 CDS
T07444
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K0C01_05945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saim03021
]
K0C01_05945
Transcription machinery [BR:
saim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
K0C01_05945
Prokaryotic type
Archaeal type
TFB
K0C01_05945
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DZR_2
HTH_3
zf-C2HC_3
Motif
Other DBs
NCBI-ProteinID:
QZA89660
LinkDB
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Position
complement(1274855..1275724)
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AA seq
289 aa
AA seq
DB search
MATTQKQTGCPECNGSLAQEGNETICSKCGLVVSEDRIDRGPEWRSFEDDEVNRERTGAP
LTRSRHDRGLSTEIGSDRNVRMTGRKRRQFARMRREHNRAQISSKAERNQVYGFTEIRRI
ISTLDLPRDIRESACTLFDSAQSEDLLRGRSLEGFAAACVYASCRVRSISRTIDEIVEHA
RASQNELEAAYSALNSELGLPVGPIAPQEYIPRFISELSVSDAIEAKALQLAKEAEEEQI
SIGRDPTGVAAGCIYTTAKKEGHTITQEEVADVADVSPVTLRKTYYDLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacacagaaacaaactggatgtccagaatgtaacggctcattagcacaggaa
ggaaatgaaactatttgctcaaagtgcggtcttgtcgtttctgaagaccggattgaccgt
gggccagaatggcgatcatttgaagatgacgaagtaaaccgtgaacgaacaggtgcgcca
ctaactcggtcccgacacgacagagggctttctacagagattggtagtgaccgtaatgtt
cgaatgaccggtcgaaaacgccgtcagtttgcacggatgcgcagagaacacaatcgagca
caaattagttcaaaggccgagcgtaaccaggtgtacggatttaccgagatccggcgaatc
atcagcacacttgatttacctcgagatattcgagagtcagcctgtacgctctttgattca
gcacagtcagaggatttgctgcgcggtcgctcactggaaggatttgctgcggcatgtgtg
tatgcatcctgccgtgttcgatccatctctcgaacaattgatgaaattgtcgaacatgct
cgtgcaagtcaaaatgaactggaggctgcatacagtgcgctcaacagcgagctgggactt
ccagttgggccaattgcaccacaggaatatattccgcgattcatatccgaactatcggtt
tcagatgccattgaggcaaaggcactacagcttgcgaaagaggcagaagaagagcaaatt
tcaattggacgggacccaacaggagttgccgccgggtgcatatatacgactgcaaaaaag
gagggacatacaatcacacaggaggaagttgcagatgttgctgatgtctcacccgtaaca
ctgcggaagacatattatgatctcaaatag
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