Salinarchaeum sp. IM2453: K0C01_06070
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Entry
K0C01_06070 CDS
T07444
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
saim
Salinarchaeum sp. IM2453
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saim03016
]
K0C01_06070 (rnz)
Enzymes [BR:
saim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
K0C01_06070 (rnz)
Transfer RNA biogenesis [BR:
saim03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
K0C01_06070 (rnz)
Prokaryotic type
K0C01_06070 (rnz)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
bHLH_LHW
Motif
Other DBs
NCBI-ProteinID:
QZA89773
LinkDB
All DBs
Position
complement(1298651..1299583)
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AA seq
310 aa
AA seq
DB search
MTLRVTFLGTSGAVPTVDRNPSGILINREGDRLLFDCGEGTQQQMMRFGTGFDISHVFIT
HVHGDHIYGLPGLLETLDFNDREASLTICVPAGKRSYLESFLERTVKNIGFQVEIIGVRP
DEVVYETEEYEIRTFDVDHRSEAVGYILTEYDRKGKFNRERAEELGVPVGPKFSELHNGN
PVELEDGRIIKPEQVVGSPRPGRKLVYTGDTRPAKMTKEVATGAELLVHDGTFQDEHADR
AAATGHSTAREAGRIAADASVKQLALVHISSRYGERVHDHKKQAQEPFDGEVVVPDDGTT
IEIPYPNSDR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgcgcgtgacttttttaggcactagtggtgcggttccgacggttgatcgaaat
ccaagtgggatactgatcaacagagagggagaccgtcttctcttcgattgtggagagggt
acccagcagcagatgatgcggtttggaacaggatttgatatctcacacgtgtttattaca
catgttcatggggaccatatttatggacttcccggattgcttgagacgctcgactttaat
gaccgggaggcgtcgctgaccatatgcgtacctgctggaaagaggtcgtatctggagagt
tttcttgaacgaactgtcaagaacattggattccaagtggaaataataggagttcggcca
gatgaagtagtatacgagacagaagaatatgaaattagaacattcgacgtcgatcaccga
tctgaagcagtcgggtatatattaactgagtacgaccgaaaagggaagtttaatcgggaa
cgagccgaagagttgggagtcccagttggtcctaagttctcagagctacacaatggaaat
ccagttgagcttgaagatggacgaatcatcaaaccagagcaagtcgtagggtcacctcgc
ccagggcgaaaacttgtatatactggggacactcgaccagcaaaaatgacgaaagaagtt
gctactggagccgagttactagtacatgacggtacatttcaagatgagcatgcagatcgt
gctgcagcgaccggacattcgacagcccgtgaagccggtcgaatagcggccgacgcatcg
gtcaagcaacttgctcttgtacacatctcctcgcggtatggcgaaagagtacatgatcat
aagaaacaagcacaggagccatttgatggcgaagtagttgttccagatgatgggacaaca
attgagataccgtatcctaatagcgacagatag
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