Salinarchaeum sp. IM2453: K0C01_07175
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Entry
K0C01_07175 CDS
T07444
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim03030
DNA replication
saim03420
Nucleotide excision repair
saim03430
Mismatch repair
saim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0C01_07175
03420 Nucleotide excision repair
K0C01_07175
03430 Mismatch repair
K0C01_07175
03440 Homologous recombination
K0C01_07175
03460 Fanconi anemia pathway
K0C01_07175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saim03000
]
K0C01_07175
03032 DNA replication proteins [BR:
saim03032
]
K0C01_07175
03400 DNA repair and recombination proteins [BR:
saim03400
]
K0C01_07175
Transcription factors [BR:
saim03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
K0C01_07175
DNA replication proteins [BR:
saim03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
K0C01_07175
DNA repair and recombination proteins [BR:
saim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
K0C01_07175
MMR (mismatch excision repair)
K0C01_07175
DSBR (double strand breaks repair)
HR (homologous recombination)
K0C01_07175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
tRNA_anti_2
OB_Ssb-like
DUF5666
Motif
Other DBs
NCBI-ProteinID:
QZA87595
LinkDB
All DBs
Position
complement(1501693..1503138)
Genome browser
AA seq
481 aa
AA seq
DB search
MGAIEETYEEEIDADISLEEYRTAVQDRIEQMGGLADEETAAMLVAHELEEDGGEVGNIA
EIKPKMDEVKFVGKVISVGELRAFERDEETDEEDDEAKGHVVNLELADESGQIRVALWDG
LAVDASETLEEGQVLRVKGRPKEGYSGVEVNAEKAEPDTETEINVSVADTYQISDLSLGL
SDVNLKGKVLDTEPVRTFDRDDGSEGKVANLVLGDETGRIRVTLWDEKAPQTEELAEGQS
VEVIDGYVRERDGSLELHAGNRGAIEKLDEEIEYEPTGTPIGEVEMGDTVDLVGVIRSSD
PKRTFDRDDGSEGQVRNIRIQDDTDDIRVALWGDLADKEIGPGERIAVTDVEIEDGWQDD
LEGSANWQSSITVLDTDPAPQQESTADSGVNLSSFEDTEQSTDVGKIESSTEVESTEQQQ
SGSGDSIEFTGTVVQSRNPVILDNGEETISIETDKQVNLGEEITVRGEKRENGRIVAAEI
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgatcgaagagacatatgaggaggagattgatgcagatatttcattagaggag
tatcgaactgccgtacaggatcggatcgagcagatgggaggacttgcagatgaagaaaca
gctgcaatgcttgttgcccatgaactcgaagaagatggtggagaagtggggaacattgcc
gaaattaagccaaagatggatgaggtgaaatttgtcggaaaggtaatatcagtcggtgaa
ctccgagcattcgagagggatgaagaaacagatgaggaggacgacgaagccaaaggacac
gtcgtaaatcttgaactcgctgacgagtccgggcagattcgggttgcactctgggatgga
ttagcagttgatgcaagtgagactctagaagaagggcaagtacttcgagtcaaaggccgc
ccaaaagagggctattcaggcgttgaggtgaatgctgaaaaagctgagcctgacacggaa
acggagatcaatgtaagtgtagccgatacatatcagatttcagacctctcactgggactt
tcagatgtcaatctgaagggtaaagtgctcgacacggagcctgtcagaacatttgaccgt
gatgatggatcagaagggaaagtcgccaaccttgtactgggcgatgaaaccggccgaatt
cgtgttacgctctgggatgaaaaagcaccacagacagaggagcttgcagaaggtcaatca
gttgaagttattgatggctatgtacgagagcgagatggttcactggagctacatgccgga
aatagaggcgcaatcgaaaaacttgatgaagagattgaatatgaaccaaccgggacacca
atcggtgaagttgagatgggagatacggtcgatttagttggggttatccgatcatcagat
ccaaagcgaacatttgatcgagatgacggatcagaaggacaggtaaggaatatccgtatt
caagatgacacagacgatattcgggttgcattgtggggagatcttgccgataaagagatt
ggccccggtgaacgaatcgcagtcacagatgttgaaattgaggacggctggcaagatgat
ctcgaaggatcagcaaactggcagtcctctatcacggtattggatactgatccagcgcca
cagcaagaatctacagcggatagtggagtaaatctctcttcgtttgaagacacagagcaa
tcaacggacgtagggaagatagaatcatcaacagaagtagaatcaactgaacaacagcag
tcaggttcaggagacagcattgagtttactggaactgttgtacagagtcgaaatcctgtt
atcttggataatggtgaagagacaatttcaatcgaaacagataaacaggtgaatttagga
gaagagatcacggttcgaggagaaaagcgggaaaatgggagaattgttgcagccgagatc
atataa
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