Salinarchaeum sp. IM2453: K0C01_07635
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Entry
K0C01_07635 CDS
T07444
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
K0C01_07635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saim03019
]
K0C01_07635
03009 Ribosome biogenesis [BR:
saim03009
]
K0C01_07635
04131 Membrane trafficking [BR:
saim04131
]
K0C01_07635
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saim04147
]
K0C01_07635
Messenger RNA biogenesis [BR:
saim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
K0C01_07635
Ribosome biogenesis [BR:
saim03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
K0C01_07635
Membrane trafficking [BR:
saim04131
]
SNARE
SNARE associated proteins
Others
K0C01_07635
Autophagy
Aggrephagy
Other aggrephagy associated proteins
K0C01_07635
Exosome [BR:
saim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K0C01_07635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_14
AAA_33
TIP49
AAA_22
AAA_lid_PRS2_C
NPHP3_N
nSTAND3
RNA_helicase
AAA_28
ABC_tran
AAA_7
IstB_IS21
AAA_25
DUF815
Sigma54_activat
Mg_chelatase
NB-ARC
AAA_3
AAA_18
Parvo_NS1
TsaE
ATPase
NACHT
AAA_24
AAA_11
AAA_17
ATPase_2
AAA_30
SLFN-g3_helicase
PhoH
Zeta_toxin
Sigma54_activ_2
AAA_19
bpMoxR
Bac_DnaA
ATP-synt_ab
Zot
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
QZA87679
UniProt:
A0A8G1H5F7
LinkDB
All DBs
Position
1584452..1586707
Genome browser
AA seq
751 aa
AA seq
DB search
MELTVKPLKQKDAGRGLAAIDRASMEELEVENGDYVLLQGPDDGRGVARVWPSYPEDRGK
SIVRIDGRLRQEVGVSVDDQVTVEPADVQPATSVTVALPQNLRIRGNISPLVRDKLSGRA
VTEGQTVPFPLSFGPLSGSGKSVPLKIASSEPSGTVVITDSTEIEISETPAEQITSDKSA
PEGVPDVTYEDIGGLENELEQVREMIELPMRHPELFRQLGIEPPKGVLLHGPPGTGKTLM
AKAVANEIDAHFQTISGPEIMSKYYGESEEQLREVFEEAEENEPAIIFIDEIDSIASKRG
ETQGDVERRVVAQLLSLMDGLEELGQVTVIAATNRIDDIDPALRRGGRFDREIEVGVPDK
EGRHEILQVHTRGMPLSDKINLEEYAENTHGFVGADIESLTKEAAMNALRRIRPEIDLES
DEIDAETLDALQVTESDLREALKGIEPSALREVFVEVPDTTWENVGGLEDTKERLKETIQ
WPLEYPEVYEQMDMESAKGVLLYGPPGTGKTLLARAIANESQSNFISVKGPELLNKYVGE
SEKGVREIFSKARENAPTVVFFDEIDAIAGERGSGSDSNVTERVVSQLLTELDGLEEMED
VVVIATTNRPDLIDNALLRPGRLDRHIHVPVPDEEARRKILEVHTRNKPLADNIDLDWLA
EETEGFVGADIEALCREASMAASRELINTVSPDEIAESVGNVLISKEHFEAALDEVSPSV
TPDVREQYKEIEQKFERTEPETTGQLGRTFQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggagcttactgttaaaccactcaaacagaaagacgctggacgcggacttgctgctatt
gatcgtgcgtcgatggaagaactcgaagtcgagaacggagactacgttttactccagggt
ccggacgatggccgcggcgtagctcgagtctggccaagttatcctgaagatcgtggcaag
agcattgttcgtatcgacggacgactccgacaggaagttggtgtcagcgttgatgatcaa
gtgactgtcgaacctgctgatgtgcaacctgctacatcggtgactgttgctcttccgcag
aacctgcgtattcgcggtaatatcagtcctcttgtccgagataagcttagcggacgtgca
gtgacagaaggtcaaacggttccgttcccgctttccttcggcccactatcaggctctggg
aaatcggtcccactcaagattgcctcaagtgagccatctggcaccgtcgtcataaccgat
tccactgaaattgaaatcagtgagacacctgccgagcagataacatcagacaaatctgct
ccagagggtgtcccagatgttacttacgaagacattggaggtctcgaaaacgaacttgaa
caggttcgggagatgattgaattgccgatgcggcacccagagttattccgccaacttggt
attgaacctccaaaaggagttctcctccacggcccgcctggcactggtaagaccctcatg
gctaaagcagttgcaaacgagattgacgctcacttccagactatctctggcccagagatt
atgtccaaatattacggtgagagtgaagagcaactacgggaagttttcgaagaagctgaa
gaaaacgaaccagctattatctttattgatgaaattgattcaattgcatccaaacgcggt
gaaacgcagggcgatgttgaacgacgggttgttgcacagctactctcgttgatggatgga
ctcgaggaacttgggcaggtaacggttattgcagcaaccaaccgtatcgacgatattgat
ccggctcttcgacgtggcggccgatttgatcgggaaattgaggttggtgtccccgacaag
gaaggtcgacatgaaatacttcaagtccacactcgtggaatgccgctttccgataagatt
aatcttgaagaatatgcggaaaacacccatggttttgttggggcagatattgagagtctc
acaaaagaagccgcaatgaatgctctgcgacgaattcgcccagaaatcgatcttgaaagt
gatgaaatcgacgcagaaacacttgatgcactacaagttaccgaatccgacctccgggaa
gcactcaaaggtattgagccgtctgctctacgagaggtctttgttgaggttccagatacg
acatgggaaaatgttggtggcctcgaagataccaaggagcgacttaaggaaacaatacaa
tggccgcttgagtaccctgaagtgtatgaacaaatggacatggagtcggcgaagggggta
ttgctctatggtccaccaggaaccggaaaaacattgctcgctagagcaattgccaacgag
agccaatcgaatttcatctccgtcaaaggtcctgagttgctgaataaatacgtaggtgaa
tctgagaagggtgttcgcgaaatcttctcgaaagcccgagaaaatgcaccaacagttgtg
ttctttgatgagattgatgcaatcgccggcgaacgtggtagcggtagcgactcaaacgta
accgagcgagtcgtttcacaactcctcacagagttagatggtcttgaggaaatggaagat
gttgttgtgattgcaacgacaaaccgtcctgatctgatcgataatgcgcttcttcgaccg
ggccgtcttgaccgacatatccatgtacctgttccagatgaggaagcccgacgaaagatc
cttgaggtgcatacccgaaataaaccgcttgcagacaatattgatcttgactggcttgct
gaagaaacagaaggctttgttggtgcagatatagaagccctctgtcgtgaagcttccatg
gctgccagccgtgaactgatcaatactgttagtccagatgaaatcgctgaaagcgtcgga
aacgtccttattagcaaagaacacttcgaagcggcactcgatgaggtcagcccaagcgtg
acccctgatgtccgagaacagtacaaagaaattgagcaaaagttcgagcgaacggaaccg
gaaacaactggtcagcttggcagaacgttccagtag
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