Salinarchaeum sp. IM2453: K0C01_07780
Help
Entry
K0C01_07780 CDS
T07444
Name
(GenBank) beta-CASP ribonuclease aCPSF1
KO
K07041
uncharacterized protein
Organism
saim
Salinarchaeum sp. IM2453
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
K0C01_07780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_TffA
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_6
Lactamase_B_2
KH_2
Lactamase_B_3
KH_1
DUF3489
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QZA87707
UniProt:
A0A8G1H5J8
LinkDB
All DBs
Position
1615868..1617796
Genome browser
AA seq
642 aa
AA seq
DB search
MSSVDKQLEDIKAEIESELPPRISVSEVSFEGPELVVYTHDPKEFADQGDLIRQLASKLR
KRITVRPDPSVLLPPAEARKRVQDVIPDEAGVTDLDFHADTGEVVIEAEKPGMVIGRHGA
TLREITKEVGWTPEVVRTPPIESSTVKNVRSFLKQERGDRRDILERVGRQIHREELSDDD
YVRVSTLGCCREVGRAAFILSTPETRILIDCGDKPGAEDEVPYLQVPEALGAGASNLDAV
VLTHAHLDHSAFIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDVAAKEGRAPPYESEMV
REAIKHTIPIEYGDVTDIAPDVKLTFHNAGHILGSAISHFHVGDGLYNVAFSGDIHYEDT
RLFNGAVNDFPRVETLILESTYGGRDDYQTDQEDSEKRLKKIIRETAERGGKVLIPAFAV
GRSQEIMLVIEEAMRNDEIPRIPVHLDGMIWEATAIHTTYPEYLRDELQNRIFHEEENPF
LAEEFNHIDGGEEERQEVADSGPCIVLSTSGMVEGGPIMSWIRHLGGEEDSSLVFVGYQA
QGTLGRRIQSGWDEIPIQTQQNGANKTQTLQLNMDVETVDGFSGHADRQGLINFVKTMNP
RPEKVLCVHGDEQSTQDLSSALYHKFDMRTFAPKNLETFRFL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagttgataagcaacttgaggatattaaagcagagattgaaagtgagttgccg
ccgcgtatttccgtttcggaggtctcatttgagggtcctgagctggtagtttatacccat
gatcccaaagagttcgccgaccagggcgatttaattcgtcaacttgcctcgaaacttcgc
aagcgaattactgttcgtcccgatccgagtgtgttgttgcctccagcggaagcacgtaag
cgcgtccaagatgtcatccctgatgaagccggagtaaccgatcttgatttccatgcagat
accggtgaagtcgttattgaagcagaaaaacctgggatggttattggacgtcacggcgca
acgcttcgagaaataacaaaagaggttggttggactccagaggtggttcgaacgcctcca
atcgagtcatcaaccgttaaaaacgtccgaagcttcctgaagcaggagcgtggagaccgc
cgtgatattctggagcgggttggtcgacaaattcatcgcgaagagctttctgatgatgac
tacgttcgtgtctctacgcttgggtgttgtcgagaagtcggtcgtgcagcgtttattctg
tcaacacccgaaacgcgaatccttattgattgtggcgataaacccggcgcagaagatgag
gttccgtatctacaggtgccagaggcccttggtgctggtgcaagtaatcttgacgcggtt
gtcttgacacacgcacatctcgaccactcggcgttcatcccgcttctgtttaagtatgga
tatgatggcccgatttactgtactgagcccacccgcgatctaatgggtcttctcacactt
gactatctcgatgtcgccgctaaggaggggagagcacccccatacgagtcagagatggtt
cgagaagcaatcaaacacaccataccaattgaatacggtgatgtgacagatatcgcccca
gatgtcaaattaacatttcataatgcgggtcacatccttggatctgcgatttcgcacttc
catgttggtgatgggttgtacaatgttgcattctctggtgacattcactatgaggatacc
cgattattcaatggagccgtaaacgatttccctcgtgttgaaacgcttatcctcgaatca
acatatggcggtcgtgatgattaccaaaccgatcaggaagattctgaaaagcgactgaaa
aagattattcgagaaactgcagagcgcggaggcaaagtactcatccctgctttcgctgtt
ggccgatcccaagagatcatgctggttattgaggaagctatgcggaatgatgaaattcct
cgcatcccggtccatcttgatggtatgatctgggaagctacagcgattcataccacatat
ccagaatatcttcgcgatgagctccagaatcgaatcttccatgaagaagaaaacccattc
ctagcagaggaattcaaccacatcgatggcggagaggaagaacgacaagaagtagctgac
agtggaccatgcatcgttctatcgacctcaggtatggttgaaggtggaccaattatgtct
tggattcgacatctcgggggagaagaagactcctctcttgtctttgttggctatcaggca
caaggaacattgggccgacgcattcagagtggctgggatgaaatcccaattcaaacccag
cagaatggagcgaacaagactcaaacacttcaacttaacatggatgttgaaacagttgac
gggttctcaggacacgctgatcgtcaaggtctcattaacttcgtcaaaacaatgaatccg
cgtccggaaaaagttctatgcgtccacggtgacgaacagtcaactcaggacctttcctct
gccctctatcataaattcgatatgcgaacctttgcacctaagaaccttgagacatttagg
ttcctataa
DBGET
integrated database retrieval system