Salinarchaeum sp. IM2453: K0C01_08375
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Entry
K0C01_08375 CDS
T07444
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim03022
Basal transcription factors
saim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K0C01_08375
09124 Replication and repair
03420 Nucleotide excision repair
K0C01_08375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saim03021
]
K0C01_08375
03036 Chromosome and associated proteins [BR:
saim03036
]
K0C01_08375
03400 DNA repair and recombination proteins [BR:
saim03400
]
K0C01_08375
Enzymes [BR:
saim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K0C01_08375
Transcription machinery [BR:
saim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K0C01_08375
Chromosome and associated proteins [BR:
saim03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
K0C01_08375
DNA repair and recombination proteins [BR:
saim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K0C01_08375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Zot
ATPase
AAA_34
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
QZA87812
UniProt:
A0A8G1H5R7
LinkDB
All DBs
Position
1732927..1735107
Genome browser
AA seq
726 aa
AA seq
DB search
MADIDDFTRFFPYEDPFENQAEAMDRIYNALVRGQDVLFEGACGTGKTLASLAPSLSFAR
ENDKTVIITTNVNQQARQFRREAAAISQQEPIQAVVFRGKGSMCHIDVDYEECQVLRDNT
YELVDAEQSKHELQQQHEHLQSQTQQTNSQADKAQSAVLEELNELNEQIEELENRATCDY
YYQNLREHNDEFYQWLFDGVRSPEEIYQYAEEADICGYELLKDGLENVDLVVCNYHHLLD
STIREQFFRWLDVDPNDVIVIFDEAHNIADTARDHARVTLSERTLERAIDELDTVDDSRV
ESARNIFSAFLEALRSTYDQRLGFGERGTIGDAWKDITITNEDKRDDLTLAFFNEYTGSG
IQSDLSEALELGEQLDQTYETAYREGDANTRQECPTLNGAQFVQQWMNTTTDTGKYPVLS
LRRDAGSEEIYGRAEIYTCIPSDVTGDLFSETYSTVLMSATLQPFDVTEDVLGLDSPVAM
VYELPFPRDNRETFAVSTPPLFSNQRDDDSVQNAIYSALSDAITFIPGNILVFFPNYTEA
NRYYEMLSGDTDASLYLDEPGMNATTIRDEFTDASNGVLFTSLWGTLTEGVSFDGDDAVA
VIVVGVPYPHLDDRAQAVQDAYDSTFADRAVDNPGWRYAVEIPTIRKTRQALGRVIRSPS
DIGTRILLDNRYTSDGVYELGDYSVHETLPKHLCDELIDVDPDKLRYALLNFYQGHNAYD
GNPPRP
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatatcgacgactttacccggttttttccatatgaagaccccttcgagaatcaa
gcagaggcgatggaccggatttacaatgcactggtccggggccaagatgtgttatttgaa
ggcgcatgtggaactggaaagacgttggcttcacttgctccatcacttagctttgcacgc
gagaatgacaaaacagtaatcattactacaaacgtcaaccagcaagcacggcagttccga
agagaggcagcggctatctcgcagcaggaaccaatacaggctgttgtgttccgaggtaaa
ggatcgatgtgtcatatcgatgttgattacgaagagtgccaggttcttcgggataataca
tacgagctcgttgatgctgaacagtctaaacatgagttacagcagcaacatgaacatcta
cagtctcagacgcaacagaccaatagtcaggcagacaaagcacagtctgctgttcttgaa
gagctaaacgaacttaacgagcaaattgaggaactcgaaaacagagcgacatgtgactac
tactatcagaatctccgagagcataatgatgaattttaccagtggctattcgatggcgtt
cgctccccagaagaaatctatcaatacgccgaagaggctgatatctgtggctatgaactg
cttaaagacgggcttgagaatgttgatctagttgtctgtaattatcatcatctgcttgac
tccacaattcgagagcagtttttccgctggcttgatgtcgatccgaatgatgtcattgta
atttttgatgaggcacacaacattgctgacactgctcgtgatcacgcccgggtcacactc
tcagaacgcactcttgaacgtgcaattgatgaactcgatactgttgatgactcgcgggtg
gagtcagcaagaaatatcttctcagcttttcttgaggctcttcgatccacgtatgatcag
cgtcttggatttggcgagcggggaacaattggagacgcatggaaggatatcacgattacc
aacgaagacaaacgtgatgacttgacccttgcattctttaacgagtacactggctctggt
attcaatccgatctcagtgaggctttagaactcggagaacagttagaccagacatatgaa
accgcttaccgagaaggtgatgcaaacactcgacaggagtgtccaacgttaaacggcgca
caatttgtccagcaatggatgaacacgacaacggatactgggaaatatccagtgttatca
cttcgtcgagatgcagggagtgaagaaatttatggtcgcgctgagatctatacgtgcatc
ccaagtgatgttactggggatctcttctccgaaacgtattcaacggtgcttatgagtgca
acactccagccgtttgatgtcacggaagatgttctggggcttgattctccagttgcgatg
gtatatgagctaccgtttccaagagataatcgtgaaacctttgccgtcagtactccgccg
ttgttttcgaaccaacgcgacgatgactctgttcaaaatgcaatttacagtgcgctttca
gatgcaataacattcattcctgggaatatcttggtctttttccctaactataccgaggct
aatcgatactatgagatgctatctggggacacagatgcatcgctgtatcttgatgaaccc
ggaatgaatgcaacgacgattcgtgatgagtttacagatgcctctaacggtgtgctgttc
acatccttgtggggtacactaacagaaggcgttagctttgatggtgacgacgctgttgct
gtcatcgttgttggtgttccatatcctcacctcgatgaccgggcacaggcagtacaggat
gcgtatgatagcacatttgctgaccgggctgtagataaccccggatggcgatatgctgtt
gagattccaacaattcgaaaaacacgacaggcacttggtcgcgttattcgctcaccatct
gatattggaacacgcattctcttagataatcgctatacatcagacggtgtgtacgaactc
ggagattacagcgtccatgagacgctgccgaaacacctctgtgacgaactgatcgatgtt
gatcctgacaaactcagatacgccttgctgaacttctatcagggacacaacgcctacgat
gggaatccacctcgcccatag
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