Salinarchaeum sp. IM2453: K0C01_09145
Help
Entry
K0C01_09145 CDS
T07444
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim00100
Steroid biosynthesis
saim00909
Sesquiterpenoid and triterpenoid biosynthesis
saim01100
Metabolic pathways
saim01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
K0C01_09145
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
K0C01_09145
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
saim01006
]
K0C01_09145
Enzymes [BR:
saim01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
K0C01_09145
Prenyltransferases [BR:
saim01006
]
Terpene biosynthesis
Squalene/phytoene synthase
K0C01_09145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF6891
Arg_decarbox_C
DUF1414
Motif
Other DBs
NCBI-ProteinID:
QZA87959
LinkDB
All DBs
Position
complement(1892213..1893256)
Genome browser
AA seq
347 aa
AA seq
DB search
MSSGRSRGEELRWCHDAVVDVSRTFAITVDQLEPPMSDRICVGYLLCRIADTVEDAGHIP
SEEQVELLDHYRETLDGERSVESFRTAVDTWIPDEQTRSADWDVVADVNRVFNAFDTLPK
SSQQAIAEPASELVSGMSMFVDRYSDTGGLRIKTVEELEEYCWYAAGTVGQLITNLLSED
ASEQERKTMANNAESFALLLQLVNIAKDVGDDYREENNVYLPAEWLDDVGIAQEEVSETQ
NADAVGSVVQRVVDRANGYLDDAQEYLMAMPDTQGNTLAAWAIPKLLAVGTIRELQKQPD
QVVNGDVKVSRAEVYALIQRFESGVPREQIPDLRSTMEREPLHLAEH
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgggtcgatctcgtggagaagaactaagatggtgccatgatgctgttgttgat
gtctcaagaacatttgcaattacggttgaccaattggagccaccaatgtcagatcgtatc
tgtgttggatatctactctgtagaattgctgacaccgttgaggacgctggacatatacca
tcagaagaacaagttgagttgctggatcactaccgtgaaacattggatggagaacggtcc
gtagaatcattccgaacagcagtcgatacttggattccggacgaacaaacgagatcggct
gattgggatgtagttgcagatgttaatcgcgtattcaatgcgttcgatacgttaccgaaa
tcgtcacaacaagccattgcggagccggcgtctgaactggtttctgggatgtcaatgttt
gttgaccgatactccgatacgggtggtttacgcatcaagacagtcgaggaattggaagaa
tactgctggtatgctgccggaacggttggccaactgattacaaatttgttatccgaagat
gcatccgaacaagagcgaaagacgatggccaataacgctgagtcgtttgcgttactgctg
caattagtgaatatagcgaaagatgttggagacgattaccgagaagagaataatgtatat
ttgccggcagaatggttagatgatgtcgggattgcacaagaagaggtttcagaaacgcag
aatgcggatgcagttgggtcagtagtccagcgagtcgtcgaccgtgcgaatggatacctt
gatgacgcccaagaatatttaatggcgatgccagacactcaaggtaacacacttgcagcg
tgggcgataccgaagttgcttgctgttggaactatacgcgaactccagaaacaaccagat
caggtagtaaacggtgacgttaaagtttcccgagcagaagtatatgcgctaatccaacga
tttgagtcaggagttccgcgagaacaaatcccggatctacgatctactatggagagggag
ccacttcatttggctgaacactaa
DBGET
integrated database retrieval system
