Salinarchaeum sp. IM2453: K0C01_10135
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Entry
K0C01_10135 CDS
T07444
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
saim
Salinarchaeum sp. IM2453
Pathway
saim03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K0C01_10135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saim03021
]
K0C01_10135
Transcription machinery [BR:
saim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
K0C01_10135
Prokaryotic type
Archaeal type
TFB
K0C01_10135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
DZR
Cyclin_C
zf_UBZ
Zn_ribbon_tTFIIB
HTH_Tnp_ISL3
Zn_Ribbon_YjdM
GFA
Zn_ribbon_8
BRF2-like_C_cyclin_rpt
DZR_2
Auto_anti-p27
Zn_ribbon_19
DUF7129
Trm112p
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
QZA88146
UniProt:
A0A8G1H6D4
LinkDB
All DBs
Position
2120397..2121347
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AA seq
316 aa
AA seq
DB search
MTDTSVREDEREKTQETTDDESVVCPECGGQIASDEEHGETVCVECGLVVEEDEIDHGPE
WRAFDAKEKDEKSRVGAPTTKMMHDEGLSTNIGWQDKDAYGQALSSRQRRKMQRLRTWNE
RFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALDENLLPGRSIEGVSTS
ALYAAARQAGTPRSLDEIAGVSRVDKDEIARTYRYVVRELGLEIEPADPKQYVPRFVSEL
ELSEEVERRARELLDSAREAGIHSGKSPVGLAAAAVYAASLLVNEKVTQKEVSEVANISE
VTIRNRYHELLEASQA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacgagcgtgagagaagacgagcgggagaaaactcaggaaacgaccgacgac
gagtctgtggtttgtccagagtgtggtggacaaattgcgagtgacgaggagcacggcgag
accgtctgtgttgaatgtggactcgttgtcgaagaagacgaaattgaccatgggccagag
tggcgtgcgtttgacgctaaagaaaaagacgaaaaatcgcgtgtcggtgcgcctacgaca
aaaatgatgcacgacgaaggtttgtcgacgaatattggttggcaagacaaagatgcatac
ggacaggctttatcgtcacggcagcgccggaaaatgcagcgccttcgtacgtggaacgag
cggttccgaactcgtgactcaaaagaacgaaatcttaagcaggcactcggtgagatcgac
cggatggcgtctgcacttggcctcccagataacgttcgtgaaactgccagcgtgatatat
cgtagggcacttgatgagaacctcttacctggtcgatcgattgaaggtgtttcaacatcg
gcgctttatgcggcggctcgacaagctggcaccccacgaagtttagatgaaattgctgga
gttagccgagtcgacaaagatgaaatcgctcgtacctatcgatacgtggttcgtgagctt
ggactggaaatcgaaccggctgatccgaagcagtatgttcctcgctttgtctctgaactt
gaactgtcagaagaggtagaacgtcgtgctcgagaactcctcgactctgcccgggaagcg
ggcatccatagtggtaaatcacctgtgggacttgcagcagcggctgtctatgcggcgtca
cttcttgttaatgaaaaagttacacagaaggaagtcagtgaagtggcgaatatctcagaa
gtgacgattcggaaccgataccacgagttacttgaggcaagtcaagcttag
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