Salinarchaeum sp. IM2453: K0C01_12610
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Entry
K0C01_12610 CDS
T07444
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
saim
Salinarchaeum sp. IM2453
Brite
KEGG Orthology (KO) [BR:
saim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saim03400
]
K0C01_12610
Enzymes [BR:
saim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0C01_12610
DNA repair and recombination proteins [BR:
saim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K0C01_12610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QZA88601
UniProt:
A0A8G1H7B8
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All DBs
Position
2653425..2656676
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AA seq
1083 aa
AA seq
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MLYVGKQEYPENEILERWKEYGPSACLQINTFDDLVSDCYERNQYDGRATHIDRPLLFRL
VELGLEEIDSPANPFYAGQQFPRAGLVDAAEDLYTELEFAGLLSPKAMRNRLVEEGLDDR
AHHVAELAEGIETVRREILADELPETYRTERMHHVNTMKTPLDELLPAVDAVVLSGFTCF
DVLERELLERISNTWPTIAVLPIQMNSDSVSGIDRGASRALETYFDLEFSRTHHEPDSTP
PAKSRQRLTANLYRHPENAPLIDDVDPTALDLTFVESETVSDEIRTAAKEIRSQLATGVP
PGSIGVVLTSPSEYADQTREWFNMYELPYTLQTDYPLTETALGEVIESVCALASEPRTID
TVLTLLTNPLVSVSNRGEPIDHHELTRVASRVETTGLDTVLEHVNDTVAATVKSIVQDAA
ILSEVELESLPGHLDALLERLGVLTTLESDDVSSAFRSHESSARTRLDRVLETLVLTAPV
ADPDIGDPTDRLERALAGVSIRRAARPDDRRLVVCGLGEAFLHGFDHVYVLGMTSSHFPS
DEDRLSFSRPIYEAHPDFEQKDAGQEARYQFGSLLASEASVRLSAPQRSQSGDPYVEADV
LTDLRRLIDLGEITKERNDATPGSQEDIQRAIGEAWNTVPDTRRQAIIDEATDTGTFTSE
QCTRIQRGVECSSARADSTLTPYDGKLSPETVGQVHAEAERKPYSPSRLETYAACGFKYY
MRRVLGIKAPDPLTREPDPGVRGSYIHDTLEHYYLSLQSELGEPVDPGGDFDTRQEQLLD
IALDRLNDAFGDYPETAFHDQWLTSVLAGLGTPADNAYYGPEAETDDGKQIARGLFYRFL
EHEFDEPAKTTARPTWFEARIGQPYDAGTLVGDDPAVIETPQGPVSVHGLIDRVDTVPGT
TPRQAVVRDYKTGTSILGEGDALLGLNFQLPLYALMVEDALDGIETVGAAYYQVSPPTSV
NSRSGQITSQEMATWQGSDDVDTPLLRYSHPHFETHGAFRRFVEEVTATRLGELATGIEE
GRFQPTVLDPSDAGCRYCDYAHVCDVRSHQRRETIKHIDDDKIAAYVPPMARDVDAEDVV
GVE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
gtgctctacgtcgggaaacaggaatatcctgaaaacgaaatcctcgaacggtggaaagaa
tatggcccatcagcatgcctccaaatcaatacgttcgacgacctcgtgtcggattgctac
gaacggaatcagtacgacggccgagcaacccatatcgaccgccctcttctctttcgactc
gtggagctcgggctcgaagagatagattccccagcaaacccgttctatgctggccaacag
ttcccccgtgcagggctcgtggatgcggctgaagacctctatactgaactcgaattcgct
ggcctgctgtcaccgaaagcgatgcggaaccggctcgtcgaagagggactggacgaccga
gcccaccacgttgcagagcttgctgaaggaattgagacggttcgtcgggagattctagct
gacgaactgccagagacgtaccggacagagcggatgcaccacgtcaacacgatgaagacg
ccgctcgatgagctgctaccggctgttgatgcggtcgttctcagtggcttcacatgcttc
gatgtgcttgaacgcgaacttctggaacgcattagcaatacgtggcccaccatcgcagtg
ctcccgatacagatgaattcggactccgtctctggaatcgatcgcggtgcctctcgtgcg
ctcgaaacgtattttgatctcgaattctcccggacacaccacgaaccagattcaacgcca
ccagcgaagtcacgacaacgcctcacggccaatctctatcgccaccccgagaacgcgccc
ctgatcgacgatgtggatccgacagcattggacctcacattcgtcgagtcggagactgtt
tcggacgagatccgaaccgcggcgaaggagatccgtagccagctcgccactggggttcca
ccgggaagtatcggcgtcgtgctgacgagtccgagtgagtacgccgaccagacgcgggaa
tggttcaatatgtatgaacttccgtacacactacagacagactatccgcttacggagacc
gcactgggggaagttatcgagtcggtttgtgcccttgccagcgaaccgcggacaatagat
acggttctcacactactcacgaatccgctggtttccgtctcgaatcggggagagccgatc
gaccatcacgagcttacacgtgtcgcctctcgcgttgagacaaccggactggacactgtt
ctcgaacacgtgaacgacacagttgcggcgacggtcaagtcgattgtacaggacgcagcg
atactgtccgaggttgagctcgaatcacttcccgggcacctagatgcacttctcgaacga
ctcggagtactaactacactggagagtgatgacgtatcgtcagccttccgatcccatgag
tcaagtgctcgaacccgtctcgatcgggtgcttgagacgctggtgctcacagccccagtt
gccgatcccgacatcggtgatccaaccgaccggctggagcgagcgctcgctggcgtgtcg
attcgaagggcagctcgtccggacgatcgccggctcgtcgtctgtggtctgggggaagcg
ttcctgcatgggttcgatcacgtctacgtgcttgggatgacttcctcgcattttccatcg
gacgaagaccgcctgtcgttttcccgtccgatctacgaggcgcatcccgattttgaacag
aaagatgccgggcaagaagcccgttaccagttcggttcgcttctggcgagtgaagcctct
gtccgcctgtcagccccgcagcgtagccagagcggtgatccatacgtcgaagcggacgta
ttgaccgatttgcgccggctcatcgatcttggtgagataacgaaagagaggaacgatgcg
acacccgggtctcaggaagacatccagcgagcgatcggcgaagcctggaacacggttccc
gacaccagacgccaagccatcatcgacgaggcgaccgacacggggacgttcacgtccgag
caatgcacccgaattcagcgtggcgtcgagtgttcgtcggcacgagcagactcaacactg
acgccgtacgatgggaagctgtctccggaaaccgttgggcaggttcacgcggaagccgag
cggaaaccgtacagtccgagtcggctcgaaacctacgccgcgtgtggattcaaatactat
atgcgtcgcgtgctcggcatcaaagccccggatccgctgacacgagagccggacccgggc
gttcggggatcctacatccacgacacactcgaacactactatctctccttacagtctgaa
ctgggagagccagtcgatcctggcggcgatttcgatacacggcaggaacaactgctggac
atcgctctcgatcggctcaacgacgcgttcggggattacccggaaaccgcgtttcacgac
cagtggctcacgtcagtgctcgctggactcggaacaccagcagacaacgcgtactacggg
ccagaggcagaaacggacgatggtaagcaaatcgcccggggactgttctaccgattcctc
gaacacgagtttgacgagccagcgaaaacgacggcgcgtccaacgtggtttgaggcacgg
atcggccagccatacgacgccggaactcttgttggagacgatccagcagttattgagacg
ccacagggaccagtctcagttcacggactcattgatcgggtcgatactgttcccgggacg
actccacgacaggcagtcgtccgagactacaagactggaacgtcgatcctcggcgaaggc
gacgccttgcttggtctgaacttccagctgccactttatgccctgatggtcgaagacgcc
cttgatggaatcgagacagtcggcgcagcctactatcaggtctcaccacctacgtccgtg
aattcacgaagtggccaaatcacgtcccaagagatggccacctggcagggaagcgacgat
gtggacacaccattgctacgctattcacaccctcactttgagacgcacggagcgttccga
aggttcgtggaagaggtcacagcaacgaggctcggggaactcgcaactgggatcgaagaa
ggccggttccagccgacggtacttgatccatcagacgcggggtgtcggtactgtgactac
gcacacgtctgcgacgtacggtcacatcagcggcgagaaacgatcaagcacattgatgac
gataaaatagcagcgtatgttcccccgatggcccgtgatgtcgatgctgaagatgtcgtg
ggggtggagtaa
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