Spiractinospora alimapuensis: J4H86_01610
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Entry
J4H86_01610 CDS
T07850
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
saiu
Spiractinospora alimapuensis
Pathway
saiu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4H86_01610 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saiu03400
]
J4H86_01610 (xth)
Enzymes [BR:
saiu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J4H86_01610 (xth)
DNA repair and recombination proteins [BR:
saiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J4H86_01610 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
COMM_domain
Motif
Other DBs
NCBI-ProteinID:
QVQ54606
LinkDB
All DBs
Position
380912..381706
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AA seq
264 aa
AA seq
DB search
MVSTVNVNGLRAAARKGLVEWLAATEAEVVCFQETRAELDQLPPEVGAPEGWHVELAPAA
DRGRAGVAVYSRGKPDAVRVGFGVAEFAESGRYLEVDVGSVTVASLYLPSGEVGTARQEE
KERFMAAFLPYLVERRDWAASGGRDFVVCGDWNIAHREADLRNWRNNRKNAGFLPEERAW
MTRVFDEVGLVDVVRSLYPEQEGPYSWWSYRGRAFDNDTGWRIDYQVASSGLAGRAEAAW
VERAASHAERWSDHAPVTVRYSGV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
attgtttcgacggtgaatgtgaacgggctgcgggcggctgcgcgtaagggcctggtggag
tggttggcggcgaccgaggccgaggtggtgtgtttccaggagacccgggcggagttggat
cagttgccgccggaggtgggtgcgccggaggggtggcacgtggagttggcgccggcggcg
gatcggggtcgggccggggtggcggtgtactcgcgggggaagccggacgcggtgcgggtg
gggttcggtgtggcggagttcgccgagtcgggccgctacctggaggtcgacgtggggtcg
gtgacggtggcgagtctgtatctgccgtcgggtgaggtggggaccgcgcggcaggaggag
aaggagcggttcatggcggcgttccttccctatctcgtggagcggcgggattgggccgcg
tcgggtggtcgggatttcgtggtgtgtggggattggaatatcgcgcaccgcgaggcggat
ttgcgtaattggcgtaacaatcggaagaacgctgggtttcttccggaggaacgtgcgtgg
atgacgcgggttttcgacgaggtgggtttggtggacgtggtgcggtcgctgtatccggag
caggaggggccgtattcgtggtggtcgtatcggggtcgggctttcgacaacgacaccggg
tggcggatcgactatcaggtggcgtcgtcggggctggcggggcgggctgaggcggcgtgg
gtggagcgtgcggcgagtcatgcggagcggtggtcggatcacgcgccggtgacggtgcgg
tattccggggtgtga
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