Spiractinospora alimapuensis: J4H86_04250
Help
Entry
J4H86_04250 CDS
T07850
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
saiu
Spiractinospora alimapuensis
Pathway
saiu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4H86_04250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saiu03400
]
J4H86_04250
Enzymes [BR:
saiu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J4H86_04250
DNA repair and recombination proteins [BR:
saiu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J4H86_04250
Prokaryotic type
J4H86_04250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QVQ53023
LinkDB
All DBs
Position
909037..909714
Genome browser
AA seq
225 aa
AA seq
DB search
MTSRPLNELMDEGWAKALEPVAETIGRMGDFLRAEIAAGRTYLPAGDNVLRAFHQPFDQV
RVLLVGQDPYPTPGHAVGLSFSVAPEVRPIPGSLRNIFTEYCDDLGLPQPSNGDLTPWTE
RGVLLLNRSLSVAPRKPNSHANKGWEDVTDQAIRALAARGTPMVSILWGSKARNLRRLMP
NVPAVESTHPSPMSAHNGFFGTRPFSRANALLQQQGADPIDWTLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacggcccctgaacgagctcatggacgagggttgggcgaaggccctggagccg
gtcgccgagacgatcggcaggatgggggacttcctgcgcgcggagatcgccgcggggcgc
acctacctccccgcgggcgataacgtgctgcgcgcgttccaccagcccttcgaccaggtc
cgggtcctgctggtcggccaggatccctaccccaccccggggcacgcggtcggcctgagc
ttctcggtggcgccggaggtccgccccatccccgggagtctgcgcaacatcttcaccgag
tactgcgacgacctcggcctcccgcaacccagcaacggcgacctcaccccgtggacggag
cgcggtgtcctgctgttgaaccggtccctctcggtggcaccgcgcaagcccaactcccac
gcgaacaagggctgggaggatgtcaccgaccaggccatccgtgccctcgccgcccgtggt
acccccatggtgtcgatcctgtggggcagcaaggcccgcaacctgcgccgcctgatgccc
aacgtcccggcggtggagtccacccaccccagccccatgtcggcccacaacggcttcttc
ggcacccgccccttcagccgcgccaacgccctgctccaacagcagggcgccgaccccatc
gactggaccctcccctag
DBGET
integrated database retrieval system
