Spiractinospora alimapuensis: J4H86_07760
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Entry
J4H86_07760 CDS
T07850
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
saiu
Spiractinospora alimapuensis
Pathway
saiu03030
DNA replication
saiu03430
Mismatch repair
saiu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4H86_07760 (holA)
03430 Mismatch repair
J4H86_07760 (holA)
03440 Homologous recombination
J4H86_07760 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saiu03032
]
J4H86_07760 (holA)
03400 DNA repair and recombination proteins [BR:
saiu03400
]
J4H86_07760 (holA)
Enzymes [BR:
saiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4H86_07760 (holA)
DNA replication proteins [BR:
saiu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J4H86_07760 (holA)
DNA repair and recombination proteins [BR:
saiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J4H86_07760 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Ribonuc_L-PSP
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QVQ53617
LinkDB
All DBs
Position
1685792..1687087
Genome browser
AA seq
431 aa
AA seq
DB search
MGDGAPEAQIRQVYANLTAVLEAADSNLRHAVRPTIYLTDTADPLVFRRVRDRRHNPAQP
PARRWSRWRDSCTPTSGARSTPSPSPAPALDVRRRLPPRETWHAGTMPATALAPLYLVVG
DEELLIDRAVAELVALARGEDPQVDVHDLLPAQVTAGSLSEVLSPSLFGERRVVVLRSAQ
DLTKDPAAAVTGILTTPVDDVTLVLVHAGGNKGKALLQAAASAGAKRVNCPKPTKNQEKL
AFVKGEFDRAGRAVTRDGAQAILDARGTDLREIAAACAQLSADAEGTINAETVARYYTGR
AEASGFTVADHAVEGKLGDALETLRWSLAIGTAPVLINSALASAIRGLAVVSQPQRGLGD
AELAKRARVPPWKLRTLRQQARGWTPAGITRALELVAETDAQVKGAGADPSYALERAVSG
IVTARRDPAAV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgacggcgccccggaggcccaaatccgccaggtgtacgccaacctcacggccgtc
ctcgaggcagcggattcgaacctgcgccacgcggtccggccgacgatctacctgacggac
accgccgacccgctggtcttccgacgggtccgcgaccgtcgccacaaccctgcccaaccg
ccggctcgtcgctggtccaggtggcgggactcgtgtaccccgacttccggggcgaggtcg
acgccctcgccgtcccccgcaccagcacttgacgtccgacgacgtctcccgccccgcgag
acatggcatgctggaaccatgcccgccaccgcgctcgctccgctgtacctggtcgtcggc
gacgaggagctcctcatcgaccgtgccgtcgccgagctcgtggcgctcgcgcgcggggag
gatcctcaggtggacgtgcacgacctcctccccgcccaggtcaccgctggttcgctgtcc
gaggttctctccccgtcattgttcggtgagcgacgcgtcgtggtgttgcgctccgcccag
gacctgacgaaggaccccgcggccgcggtgaccggcatcctgaccacgcccgtcgacgac
gtgacactggtgctcgtccacgccggaggcaacaagggcaaggccctcctccaagccgcg
gccagcgccggcgccaagcgcgtcaactgccccaagccgacgaagaaccaggagaagctg
gccttcgtcaagggtgagttcgaccgtgcgggtcgtgcggtcactcgggacggcgcgcag
gcgatcctggacgcacgaggcaccgacctccgggagatcgccgcggcgtgcgcgcagctc
agcgccgacgccgagggcaccatcaacgccgagaccgtggcccgctactacacgggccgc
gcggaggcctcggggttcaccgtggcggatcacgccgtcgagggcaaactgggggacgcg
ctggagaccctacggtggtccctcgccatcggcaccgccccggttctgatcaacagtgcg
ctggccagtgcgatccgcggtctcgccgtggtctcacagccgcagcgcgggctgggcgac
gccgagctcgccaagcgtgcccgcgtccctccgtggaaactacggaccctgcgtcagcag
gcccgtggctggacccctgccggaatcacgcgcgcgctggaactggtcgcggaaaccgac
gcccaggtcaagggggccggcgccgaccccagttacgcgctcgagcgggccgtcagcggc
atcgtgaccgcccggcgcgacccagcggcggtctga
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