Spiractinospora alimapuensis: J4H86_10145
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Entry
J4H86_10145 CDS
T07850
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saiu
Spiractinospora alimapuensis
Pathway
saiu03420
Nucleotide excision repair
saiu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4H86_10145
03430 Mismatch repair
J4H86_10145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saiu03400
]
J4H86_10145
Enzymes [BR:
saiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4H86_10145
DNA repair and recombination proteins [BR:
saiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4H86_10145
MMR (mismatch excision repair)
Other MMR factors
J4H86_10145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QVQ54812
LinkDB
All DBs
Position
complement(2238574..2242017)
Genome browser
AA seq
1147 aa
AA seq
DB search
MAPGAVGLTPVPDQTWTPGQLARLLGRPEPTTEQAAVIAAPLSPCVVVAGAGSGKSETMA
ARVVWLVANGYVRPERVLGLTFTRKAANELADRVRDRLDALREADAVPTEVLDGEPTVST
YHSFATQIVGDHALREGVEPSVRLITEAVSWQLARTVVGEFDGEMDAVTNGPADVTKAVL
ELSGEISEHLSDPNDVREVGNWLRTRAAALKKQTKPVRDMLDRQARREQLLPLVERYRTA
KAAREVLDHGDQITLAARIAARHPEVGLSERDRFHVVLLDEYQDTSHAQLVLLRSLFGDG
HPVTAVGDPCQSIYGWRGASAGNLVSFPTDFPVRPGTPAPVRQLATSFRNGERILDVATV
ASDPLRADIAGEGEDDSGTGVVPILHPGPDRRGKGTIACGLFETDLEEADWIGDQVRSAL
DASTASPEEPLLTPGDVAVLCRKRSLFPVLRGALERRGIPVEVVGLGGLLTVPEVRDVVS
TLRILHDPTAGNELVRLLTGRRWRLGPRDLVALGARAKELAESGRRDLTTEAPEQEVSGD
LLRQTLLDLTAERGSLLDALHDPGPPERYSARGLERIGQLAAELRGLTGFGGHALTELIS
EVERLHGLDIEVPARPGVAPTVARADLDAFADAAARFSGSSEDPGLGAFLAYLSSAEDNE
HGLEGGRVGTSDTVKLMTVHGAKGLQWSMVIVPGLCGGASAPVFPAKPVRTSNWLKNERR
LPFPLRGDRAALPTLEDVDPAAIADLDAANVARERLEERRLFYVALTRAADTLLCTGHWW
GEAQRTRGPSEFLEEVRAACAGGAGRVARWAAPPEEDERNPRLGDPVPVPWPAPDTPLEH
AAPALDDLDGGPDMEFEEPSSQPEEEGVEPESDPVTGAAASYHASVAAARLLAESRDGVG
ERWLEQLSDAHHLPEWQRRRAEAWQRDTDLLLAHRDRTEPQNSTGADVVLPRRVSVSALV
GLRRDPAALAREIRRPMPHPPTPHTRRGTSFHAWLEGRFGQGALLGPDELPGAADDALAP
DEDFDRLRENFESGEWAERTPVAVEVAFETPIAGHLVRGRIDAVFADGDRYDVVDWKTGR
PPATQEERDAAAVQLAAYRAAWAELADVPLDRVGAAFYFVRTQQTIRPADLLTPEALAAL
LDDLPPP
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctggcgcggtgggactgactccggtgccggaccagacctggactccgggacaa
ctggcccggctcctcgggcggccggagccgacgaccgagcaggcggcggtgatcgccgcg
ccactgagtccctgtgtcgtggtcgcgggggcggggtcgggcaagagcgagaccatggcg
gcgcgggtggtgtggctggtcgccaacggatatgtgcgaccggagcgggttctggggctg
accttcacccgcaaggccgcgaacgagctcgccgaccgggtccgcgaccgactcgacgcg
ctccgcgaggccgacgcggttcccaccgaggtactggacggcgagccgaccgtgtccacc
taccactcgttcgcgacgcagatcgtgggggaccacgcgctgcgggagggggtcgagccc
tcggttcgactcatcaccgaggcggtttcctggcagctcgcccgcacggtcgtcggcgag
ttcgacggggagatggacgcggtgaccaacggtccggccgacgtcaccaaagcggtgctg
gagctcagtggcgagatctccgaacatctcagcgaccccaacgacgtccgcgaggtcggc
aactggctccgcacccgcgccgccgccctgaagaagcagaccaaaccggtccgggacatg
ctggatcgacaggcccggcgggaacaactcctgcccctcgtggagcggtaccgcaccgcg
aaggcggcacgtgaggtgctcgaccacggcgaccagatcaccctggccgcgcggatcgcc
gcccgacatcccgaggtcggcctcagcgagcgggaccgtttccacgtcgtcctgctggat
gagtaccaggacaccagtcacgcccagctcgtcctgttgcggtcgctgttcggcgacggc
catccggtgaccgccgttggtgacccctgccagtcgatctacggttggcgaggggcgagt
gccgggaacctggtgagcttccccaccgatttccccgtgcgccccggcacgcccgccccg
gtgcgccaactcgccaccagcttccgcaacggggagcggatcctcgacgtcgcgaccgtc
gcctccgacccgctgcgcgccgacatcgcgggagagggagaggacgacagcgggaccggc
gtggtgccgatcctccaccccgggccggaccgcaggggcaagggcaccatcgcctgcgga
ctgttcgagaccgacctggaggaggcggactggatcggtgaccaggtccgatccgcgctc
gacgcctccacggccagcccggaggaaccactcctcaccccgggcgacgtcgccgtgctc
tgccgcaagcgctccctgttccctgtcctgcgcggcgccctggagcggcggggtatcccg
gtcgaggtggtgggcctgggcggactactgaccgtgccggaggtccgggacgtcgtgtcg
acactgcggatcctgcacgacccgacggcgggcaacgaactcgtgcgtctcctcaccggc
cggcgatggcggctcggcccccgcgacctggtggccctcggcgcccgggccaaggaactg
gccgagtcgggccggcgcgacctcaccacggaggccccggaacaggaggtgtccggcgac
ctactgcggcagacgctcctggacctcacggccgagcgcggcagcctcctggacgccctg
cacgaccccggccccccggagcgctactccgcccgcggcctcgaacgcatcggccaactc
gccgccgaactgcgcggactcaccgggttcggtgggcacgccctcaccgagctcatcagc
gaggtggaacgactgcacggcctggacatcgaggtccccgcccggcccggcgtcgcccct
accgtggcccgcgcggacctcgacgcgttcgccgacgccgcggcgcggttctccgggtcg
agcgaggatccggggctgggcgcgtttctcgcctacctgtcctcggcggaggacaacgag
cacggcctggaggggggccgggtcgggacctcggacacggtgaaactcatgacggtgcac
ggggccaaggggctccagtggtcgatggtgatcgtccccgggctctgcggaggagcgagc
gccccggtcttcccggccaaacccgtccgcaccagcaactggctgaagaacgaacgacgg
ctaccgtttcccctgcggggggaccgcgccgcgctgccgacactggaggacgtggatccc
gccgcgatcgcggacctcgacgcggcgaacgtcgcccgagaacggctggaagaacgccgt
ctcttctacgtggcgctcacccgtgcggccgacaccctgttgtgtaccgggcactggtgg
ggtgaggcgcagcggacgcggggcccctcggagttcctggaggaggtccgggccgcctgc
gcgggcggtgcggggcgcgtcgcccggtgggcggcgccaccggaggaggacgaacgcaat
ccacggctcggtgaccccgtccccgttccgtggcccgcgcccgacacccccctcgaacac
gccgcacccgccctggacgacctggatggcggcccagacatggagttcgaagagccctca
tcccagcccgaggaggaaggggtcgagcccgagtccgacccggtgacgggagcggcggcg
tcgtaccacgccagcgtggccgcggcccgactgctcgccgaatcccgcgacggtgtcggt
gaacgctggctggagcagctctccgacgcacaccaccttcccgagtggcagcggcgccgc
gcggaagcctggcagcgcgacacggacctgttgctggcacaccgggaccgcaccgaaccc
cagaactccacgggggcggacgtggtgctcccgcgccgcgtctccgtttcggcactggtc
ggactccggcgggatccggccgcgctcgcccgggagatcaggcgcccgatgccacaccca
cccactccccacaccaggcgtggaacgtcgttccacgcctggctggagggccgtttcggc
cagggagctctgctgggcccggacgagcttcccggcgccgccgacgacgcgctcgctccg
gacgaggacttcgaccgcctgcgagagaacttcgagtccggcgagtgggccgaacgcaca
ccggtcgcggtggaggtcgcgttcgagaccccgatcgcgggccacctggtgcggggccgg
atcgacgccgtgttcgccgacggcgaccgctacgacgtcgtcgactggaagaccggacgc
ccgccggccacccaggaggagcgcgacgccgccgcggtccagctcgccgcctaccgcgcg
gcgtgggccgagctcgcggacgtacccctcgaccgggttggcgcggcgttctacttcgtg
agaacccaacagacgatccgccccgccgacctcctgacccccgaagccctggcggccctc
ctcgacgacctcccgcctccctag
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