Spiractinospora alimapuensis: J4H86_10645
Help
Entry
J4H86_10645 CDS
T07850
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
saiu
Spiractinospora alimapuensis
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saiu03021
]
J4H86_10645
Transcription machinery [BR:
saiu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4H86_10645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
DUF7343
HTH_Crp_2
HTH_5
MarR
Sigma70_ECF
HTH_3
NirdL-like_HTH
IF2_N
GerE
HTH_24
HTH_AraC
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QVQ54107
LinkDB
All DBs
Position
2353675..2354433
Genome browser
AA seq
252 aa
AA seq
DB search
MPDRARARELFRQLGDYDADSPERQRIRDELVELHLPLVEYLARRFRNRGEWLDDLTQVA
TIGLIKSIDRFDLDRGVEFSTYATPTIVGEIKRHFRDKGWAVRVPRRLQELKLSLTKAVG
ELSQSKGRAPTVHELAEHLSMTEEEVLEGLESANAYSTVSLDAPDSGDEDAPAVADSLGI
IDDSLEGVEYRESLKPLLEQLPTREKRILLLRFFGNMTQSQIAAELGISQMHVSRLLART
LAQLRQALTTED
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgccggatcgagcgcgggcgcgggagctcttccggcaactcggtgactacgacgcggac
tccccggaacgtcagcgcatacgcgacgaactcgtggagctgcacctaccgctggttgag
tacctcgcacggcggttccggaaccggggtgagtggctggacgacctcacccaggtggcg
acgatcgggctgatcaagtcgatcgaccggttcgacctggaccgcggagtggagttctcc
acctacgccacgcccaccatcgtgggcgagatcaaacggcacttccgcgacaaggggtgg
gcggttcgcgtaccccgccggctccaggagctcaagctctccctcaccaaggccgtgggt
gagctgtcgcagagcaagggtcgggcacccacggtgcacgagctcgccgagcacctgagc
atgaccgaggaggaggtgctggagggcctggagtccgccaacgcctattccacggtctcc
ctggacgctccggacagcggcgacgaggacgcaccggccgtggcggactcactggggatc
atcgacgactcgctggaaggtgtggagtaccgggagtcgctcaagcctctcctggagcag
cttcccacgcgggagaagcggatcctgttgctgcggttcttcggcaacatgacgcagtca
cagatcgcggccgagctggggatctcccagatgcacgtgtcgcgcctcctcgcccgcacg
ctggcccagcttcggcaggcgttgacgacggaggactga
DBGET
integrated database retrieval system
