Spiractinospora alimapuensis: J4H86_13305
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Entry
J4H86_13305 CDS
T07850
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
saiu
Spiractinospora alimapuensis
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saiu03000
]
J4H86_13305
Transcription factors [BR:
saiu03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
J4H86_13305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AsnC-type
HTH_24
AsnC_trans_reg
NirdL-like_HTH
HTH_11
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_28
AsnC_trans_reg_3
HTH_20
MarR_2
GntR
HTH_IclR
HTH_29
HTH_Tnp_ISL3
Fe_dep_repress
HTH_DeoR
MarR
HTH_38
HTH_50
PaaX
DUF7343
HTH_36
HTH_5
SAC9_C
TrmB
HrcA_DNA-bdg
DUF2089
HTH_PafC
HTH_30
CggR_N
GerE
HTH_Mga
HTH_Crp_2
Phage_terminase
AlkZ-rel
LexA_DNA_bind
HTH_Tnp_1
Terminase_5
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QVQ54547
LinkDB
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Position
complement(2909188..2909706)
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AA seq
172 aa
AA seq
DB search
MRPVSSPPRATPDVPLDQIDREILRILQGNGRAPYREIARELGVSEGTVRNRVNRLQSDG
VLTIAAITDQFALGYRVTAFCLIRVQVGYQASVVEELSRWDDVIYVSSCTGRADLYIQVV
CRDHEHLWELLTQRLPSVEGVADVETFQEIKLHKVSYVYPNFGEGAAGPVSE
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgagaccggtcagcagcccgccgcgggccacacccgacgtgccactggaccagatcgac
cgcgagatcctgcggatcctccagggcaacgggcgcgcaccctaccgcgagatcgcccgc
gagctcggggtctccgaaggaacggtccgtaaccgggtcaaccgactgcagtcggacggc
gtgctcaccatcgccgccatcaccgaccagttcgccctcggctaccgggtgaccgccttc
tgcctgatccgggtccaggtcggataccaggcgtcggtggtcgaggagctctcccggtgg
gacgacgtcatctacgtctcctcctgcaccggtcgggccgacctctacatccaggtcgtg
tgtcgggaccacgaacacctctgggagctgctgacccagcgcctgccgtccgtcgagggc
gtcgcggacgtcgagacgttccaggagatcaagctgcacaaggtctcctacgtctacccc
aacttcggcgagggcgccgccggccccgtgtcggagtga
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