Spiractinospora alimapuensis: J4H86_14505
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Entry
J4H86_14505 CDS
T07850
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
saiu
Spiractinospora alimapuensis
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saiu03021
]
J4H86_14505
Transcription machinery [BR:
saiu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4H86_14505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_31
HTH_Crp_2
DUF7343
HTH_3
GerE
HTH_28
MarR
Motif
Other DBs
NCBI-ProteinID:
QVQ50169
LinkDB
All DBs
Position
3159617..3160435
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AA seq
272 aa
AA seq
DB search
MPNAPRRQSTNTVTTNSTPVRDSESELLLGELKRLEENDPATREVRERVVQLWRPVANQV
AWRYANRGEPVEDLRQTAMVGLMKAIARYDPARSGRFASYLLPTVTGEVKRHFRDHTWAV
RVPRRHQENRGRLNRATTALTQRYGRSPTVDELADHLGLGRDETVELIEASSAYSALSLE
APIRDSEGSITTLGDTLGEFDAALDRLVDREALRPAVARLPERERLILALRFTGERTQSE
IATAVGCSQMHVSRILSGVLRRLRRELTPHED
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacgcgccacggcgacagtcgaccaacactgtcaccactaactcgacaccggtt
cgggactcggagtccgaactcctcctcggtgagctcaagcgcttggaggagaacgacccg
gccacacgggaggtacgcgagcgggtcgtccagctctggcgacccgtcgccaaccaggtc
gcatggcggtacgccaaccgcggcgaacccgtcgaggacctgcgccagacggcgatggtc
ggcctgatgaaggccatcgcccgctacgaccccgcgcgaagtggtcgcttcgcgtcctac
ctactgccgaccgtcaccggagaggtgaaacgccacttccgcgaccacacgtgggcggtc
cgtgttccgcgacgccatcaggagaaccggggccggttgaaccgggccacgacggcgctc
acccagcggtacgggcgttctccgaccgtcgacgaactggccgaccacctggggctcggt
cgggacgagaccgtggagttgatcgaggcgtcatccgcctacagcgccctgtcgctggaa
gcgccgatccgcgactccgagggctccatcacgacactcggcgacaccctgggggagttc
gacgcggccctggaccggctcgtcgaccgtgaagcccttcgacccgcggtcgcgcggttg
cccgaacgcgaacgactcatcctcgcgctgcgcttcaccggcgaacgaacccagtcggag
atcgccaccgcagtggggtgctcccagatgcacgtctcacggatcctgtccggtgtcctg
cggcgactccgtcgagagctgaccccccatgaggactga
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