Spiractinospora alimapuensis: J4H86_14890
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Entry
J4H86_14890 CDS
T07850
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
saiu
Spiractinospora alimapuensis
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saiu03009
]
J4H86_14890
Ribosome biogenesis [BR:
saiu03009
]
Prokaryotic type
ribosomal protein modification factors
J4H86_14890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
DUF6129
Motif
Other DBs
NCBI-ProteinID:
QVQ50236
LinkDB
All DBs
Position
3239622..3240977
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AA seq
451 aa
AA seq
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MTVPPERTETLPRSLRQMRTLLSPYGLVSRTHRLAPAHGEPPFEIYSSYLGNPGAVLAAQ
SAWDHDLSQGNFDGAGGALDPEVAAHLSIAESLERYSSCAWDSRDMFWATAEELGDDAIA
PAAFPNCSERELADPSCGLVPSDPRIPLRWVQGWSFTRDRPVYVPALTVWMRFPPESAAE
RFMHPISTGCAAHSDPVAAVVNGLLEVVERDAIALTWLQRMRLPRLHVDEGAFDDLSRRY
AAKAESQHLRTELFDATTDLGIPVIYGVQLADHDPEVAQMVAATCDPDPARAVAKMYREM
ASLRIALRHIAKSSRDIPLNEDNTSVFGGALMSGTVDQRHRFDFLLEGERETRDIRDVPS
IVSDSPTDKLDWLMRRMDAAGCEVVAVDITTDEARQVGATVTRILVPQLMPLSFVHKARY
LAHARLYEAPRAMGHHVHAESEINPHLQPFA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtaccccccgaacgcacagagacgcttccccgttcgctgcgccagatgcgcacg
ttgctgtccccctacggcctggtgagcaggacccaccgcctcgccccggcgcatggcgag
ccccctttcgagatctactcgtcctacctggggaatccgggcgccgtgctggccgcccag
tcggcgtgggaccacgatctgtcccaggggaacttcgacggcgccggaggtgcgctggac
ccggaggtcgccgcgcacctctccatcgcggagtccctggaacggtactcgtcgtgcgcg
tgggactcacgggacatgttctgggcgacggcggaggagctcggtgacgacgcgatcgcc
cccgcggcgttcccgaactgttcggagcgggaactcgcggacccgagctgtggcctcgtc
ccctccgatccgcgtatcccgctgcgctgggtccaggggtggtccttcacgcgggaccgc
ccggtgtacgtcccggccctgaccgtgtggatgaggttcccaccggagtcggccgcggag
cggttcatgcacccgatctccaccggatgcgcggcccactccgatcctgtcgcggcggtc
gtgaacggtctcctggaggtcgtcgagcgggacgcgatcgcgctcacgtggctgcagcgc
atgagactgcctcgactccacgtcgacgagggcgccttcgacgacctctcgcgcagatac
gcggcgaaggcggagagccagcacctgcgcaccgagctgttcgacgcgaccaccgacctc
ggcatccccgtgatctacggggtccagttggccgaccacgatccggaagtggcccagatg
gtcgccgccacgtgtgaccccgatccggctcgcgcggtcgcgaagatgtaccgggagatg
gcctcgctgcgaatcgcgctgcgacacatcgccaaatcgagccgggatatcccactcaac
gaggacaacaccagtgtcttcggtggcgccctgatgtcgggaaccgtggaccaacgccac
cggtttgatttccttctcgaaggggaacgggaaacccgagatatccgcgacgttccttct
attgtttctgacagtccgacggataaactggactggctaatgcgacgcatggacgccgcc
ggatgtgaagttgtcgcagtggacataaccaccgacgaggctcggcaagtcggcgcgacg
gtcacccgaatcctcgtcccacaactcatgccgctctccttcgtacacaaagcccgttac
ctcgcccacgcgcgcctctacgaggctccccgggcaatgggacaccacgtccacgcagaa
tccgaaataaacccccatctgcagcctttcgcgtaa
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