Spiractinospora alimapuensis: J4H86_20065
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Entry
J4H86_20065 CDS
T07850
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saiu
Spiractinospora alimapuensis
Pathway
saiu03420
Nucleotide excision repair
saiu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4H86_20065
03430 Mismatch repair
J4H86_20065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saiu03400
]
J4H86_20065
Enzymes [BR:
saiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4H86_20065
DNA repair and recombination proteins [BR:
saiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4H86_20065
MMR (mismatch excision repair)
Other MMR factors
J4H86_20065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
AAA_11
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QVQ51108
LinkDB
All DBs
Position
4305268..4307862
Genome browser
AA seq
864 aa
AA seq
DB search
MTSSCHLTVAERSPPQGAFPIFPGIHGVRPGKSLPLASRPGDPIPRREASWADGTVRRPG
GVDGESGANGPAELKQRVRFRAPRLECVSVHESLLEGLNAAQRDAVTHQGSPLLIVAGAG
SGKTRVLTHRIAYLLRERDVRPGEILAITFTNKAAAEMRERIEGLLGARVARTMWIMTFH
AACVRILRREATRLGYPSNFTIYDSGDSQRLMQLVCRELDLDTKRYPPRSFSAEVSNLKN
ELVDYDTFEARADNDRERVLAQAYKLYQRRLQEAGAMDFDDLIMLTVNLMELFPDVAEHY
QRRFRHIMVDEYQDTNHAQYELVRTLATPPRPTDDGAPEIEPAELCVVGDADQSIYAFRG
ATIRNIVEFERDYPNARTVLLEQNYRSTNTILRAANAVISQNTDRKPKNLWSEVGTGAAI
VGYVADNEHDEASFVVSEIDRLTDAGDCRPGDVAVFYRTNAQSRVLEEIFIRHGLPYRIV
GGVRFYERKEIRDVLAYLRVLANPDDTVALRRILNVPKRGIGDRAEATVEVFAARERISF
AAALRRANEAPGVATRSVKAIGQFVALLDELMELVPTSSPAEIIEAVLRRTGYLEELTNS
KDLQDESRVENLEEFVEVAREFEQTFTGPLYPEDTAQDETTQSGAESVVAEEGADEGEES
ADQPGPPTLVDFLEQVALVADADQVEEDEGDGVVTLMTLHAAKGLEFPVVFLTGMEDGVF
PHMRTLGDRNELEEERRLAYVGITRAKHRLHISRAAVRSAWGTPSYNPPSRFLAEIPGDL
MDWQRTGAESRSMVSAGRPAPPRARSARNVPSLAAGDRVTHDSFGLGTVLEVEGSGERSR
VRIDFGGDVGSKDLLLGYAPVEKL
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgacctcatcgtgtcatctgaccgtcgccgaacgcagtcctccccagggggcatttccg
atctttccgggaattcacggtgttcgccctggtaagtcccttcccctcgcctctcgacct
ggcgatcccataccgcgacgggaggcctcgtgggccgacgggaccgtccgccgaccgggc
ggcgtggacggcgagagtggggccaacggtcccgctgaactaaagcaacgtgtccgattc
cgagcgcctaggctggagtgcgtgtcggtccatgaatcactcctcgaaggcctgaacgcc
gcacagcgcgacgcggtgacgcaccaggggtcgcccctgctgatcgtcgcgggagccggg
tccggaaagacccgtgttctcacccatcgcatcgcctacctgctgcgagagcgtgatgtg
cggcccggtgagatcctcgcgatcacgttcaccaacaaggccgcggccgagatgcgggaa
cggatcgaaggcctcctgggcgcacgcgtcgcgcgcacgatgtggatcatgacgttccac
gcggcctgcgtgcggattctccgccgggaggcaacgcgtctgggttacccgagcaacttc
accatctacgactcgggcgactcccagaggctgatgcagctcgtctgccgtgagctcgac
ctcgacaccaagaggtaccccccgcggtccttctcggccgaggtctccaacctgaagaac
gagctcgtcgactacgacaccttcgaggcccgcgcggacaacgaccgcgaacgcgtcctc
gcccaggcgtacaagctgtaccagcgccggctgcaggaggccggggccatggacttcgac
gacctcatcatgttgaccgtgaacctcatggagctgttccccgacgtggcggagcactac
cagcggcggttccggcacatcatggtcgacgagtaccaggacaccaaccacgcccagtac
gagctggtccgcaccctcgccacgcccccgcggccgaccgacgacggcgcgccggagatc
gaaccggcggagctctgcgtcgtcggcgacgccgaccagtccatctacgccttccggggc
gcgacgatccgcaacatcgtcgagttcgagcgggactacccgaacgcgcggaccgtgctg
ctggaacagaactaccggtccacgaacacgatcctgcgcgcggccaacgcggtcatcagc
caaaacacggaccgaaaacccaagaacctctggtcggaggtggggacgggcgccgcgatc
gtcggatacgtcgccgacaacgagcacgacgaggcctcgttcgtcgtcagtgagatcgac
cgactcaccgacgccggggactgtcggccgggtgacgtcgcggtcttctatcgcaccaac
gcgcagtcccgggtgctcgaggagatcttcatccggcacgggcttccgtaccggatcgtc
ggcggggtgcgcttctacgagcgcaaggagatccgcgacgtcctggcctatctgcgcgtg
ctggccaacccggacgacaccgtggcgctgcgccgcatcctcaacgttccgaagcggggg
atcggtgaccgcgcggaggccaccgtcgaggtcttcgccgcgcgcgagcgaatctcgttc
gcggcggccctacgccgagcgaacgaggcgcccggtgtggccacccgctcggtgaaggcc
atcggccagttcgtcgccctgctggacgagctcatggagctcgtccccacgagctcgccg
gccgagatcatcgaggccgtgctgcgacggaccggttatctggaagaactcaccaactcc
aaggacctccaggacgagagccgggtggagaacctggaggagttcgtggaggtcgcccgg
gagttcgagcagaccttcaccggacccctctacccggaggacaccgcgcaggacgagacc
acccagtccggcgccgagtctgtggtggccgaggaaggcgccgacgaaggggaggaatcg
gcggaccaacccggcccgcccaccctcgtggacttcctggaacaggtggctctggtcgcc
gacgccgaccaggtggaagaggacgagggcgacggagtagtcacgttgatgacgctgcac
gccgccaagggactggagttccctgtcgtcttcctgaccggaatggaggacggcgtcttc
ccgcacatgcgaaccctcggggaccgcaacgagctggaagaggaacgtcggctggcctac
gtcggcatcactcgggcgaagcaccggctgcacatcagcagggcggccgtacgcagcgcg
tgggggacacccagctacaacccaccgtcccgattcctggcggagattcccggcgacctc
atggactggcagcgcacgggcgcggagtctcgatccatggtctcggcaggcagaccggct
ccgccgcgggcgcgcagcgcgcgcaacgtcccgtcgttggcggcaggggaccgcgtcacc
cacgactcgttcgggctgggaaccgttctcgaggtggagggcagcggcgaacgcagccgg
gtacgcatcgacttcggtggggacgtcggcagcaaggacctcctcctgggctacgcaccg
gtcgagaagctgtga
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