Spiractinospora alimapuensis: J4H86_20115
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Entry
J4H86_20115 CDS
T07850
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
saiu
Spiractinospora alimapuensis
Pathway
saiu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4H86_20115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saiu03000
]
J4H86_20115
03400 DNA repair and recombination proteins [BR:
saiu03400
]
J4H86_20115
Enzymes [BR:
saiu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
J4H86_20115
Transcription factors [BR:
saiu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
J4H86_20115
DNA repair and recombination proteins [BR:
saiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J4H86_20115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
NdhN
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QVQ51115
LinkDB
All DBs
Position
complement(4319550..4320986)
Genome browser
AA seq
478 aa
AA seq
DB search
MDDDQRYRAVRSRDTRFDGRFYTGVTSTGIYCRPSCPAIVPKRSNLRFYRSSAAAQAAGF
RACKRCRPDASPGSPEWNLRGDVVARAIRLIADGTIDRGGVSGLASSLGYSERQLRRHLT
EELGAGPLALARAQRAQTARILIETTDVPMAEIAFAAGFASVRQFNDTIHAVFAATPSEM
RTRAARRPGDPAPGTVSLRLPTRQPFDAGTTLRFLADRAIPGVEEWVHGVYRRVLRLHHG
TGIVELAPESDRAVTCRLRLQDLRDLTAAVARCRHLLDLDADPQAVNEVLSTSPIFAPLA
ARRPGLRAPGQVDPTELAVRAVLGQQISVAAARTHAGRLVARIGDPLPSPSGGLTHVFPS
AETIAAAPLETLPMPRTRATALSSLTDAVARGELDLGPGCDRERSEAQLRTMRGIGPWTA
AYIRMRGMGDPDVFLAEDLGVRRALGRGTLSTAAARRLGDPCAPFRSYATHHLWNQHR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagagataccgcgcggtgcgcagccgggacacccgtttcgacgggcgt
ttctacaccggcgtcaccagcacgggcatctactgccgtccgagctgccccgcgatcgtg
cccaagcgttccaacctccgtttctaccgctcctcggccgccgcgcaggccgccggattc
cgcgcgtgcaagagatgccggcccgacgcctcccccggctccccggagtggaacctgcgc
ggcgacgtcgtcgcgcgcgccatccgactgatcgccgacggcaccatcgatcgtggtggc
gtcagcggcctcgcctcctccctcggctacagcgagcgacagctccgccggcacctcacc
gaggagctaggtgcggggccgctcgccctcgcccgggcgcaacgcgcgcagaccgcccgc
atcctcatcgagaccaccgacgtccccatggcggagatcgccttcgcggctggcttcgcg
agcgtccgccagttcaacgacaccatccacgcggtcttcgcggccacgccctcggagatg
cgcacccgtgccgcccgccgaccaggcgaccccgcccccgggacggtgagtctgcgtctg
cccacgcgacagccgttcgacgccgggacgacactgcggttcctcgccgaccgagcgatc
cccggggtggaggagtgggtccacggggtctaccggcgcgtcctgcgccttcaccacggg
accgggatcgtggagctcgccccggagtccgaccgggcggtcacctgtcggctgcggctc
caggatctccgcgacctcaccgcggccgtggcccgctgccgacaccttctcgacctcgac
gccgacccgcaggccgtcaacgaggtcctcagcaccagtccgatcttcgccccactcgcg
gcccgccgccccggcctccgcgcacccggacaggtggaccccacggagctcgcggtacgc
gcggtcctcggccaacagatctcggtcgccgccgcacgcacccacgccggacgactcgtc
gcccggatcggagaccccctgcccagccccagcggcggcctcacccacgtgttccccagc
gccgagaccatcgcggcggcgccgctggagacactcccgatgccccggacccgggccacg
gcgctctcctcactgaccgacgcggtggcccgcggcgaactcgacctcggtcccggatgt
gaccgagagcggagcgaggcacaactgcggacgatgcgtggcatcggaccctggaccgcc
gcctacattcgaatgcggggaatgggtgaccccgacgtgttcctcgccgaggacctcggt
gtgcgccgggccctcgggcgcggcacactctcgaccgccgcggcccgacgcctcggcgac
ccgtgcgcgccgttccgaagctacgccacccatcacctgtggaaccagcaccgatag
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