Spiractinospora alimapuensis: J4H86_21670
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Entry
J4H86_21670 CDS
T07850
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
saiu
Spiractinospora alimapuensis
Pathway
saiu02024
Quorum sensing
saiu03060
Protein export
saiu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
J4H86_21670 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
J4H86_21670 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J4H86_21670 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
saiu02044
]
J4H86_21670 (secD)
Secretion system [BR:
saiu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
J4H86_21670 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
DUF1286
Motif
Other DBs
NCBI-ProteinID:
QVQ51388
LinkDB
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Position
complement(4628194..4630860)
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AA seq
888 aa
AA seq
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MSTSSGAGGRVLRAVFSLLVMLGALGAALYIPPQLGLDLSGGTQIVLETHDSDSGVEANA
ENTEKAVEVLRQRIDSLGVAESTITRSGENRIIVELPGVQDPTEAADILGTTAQLTFHPV
VGVADPGAQQPGMPGEELGEGLPPQDEDAPDEDAGDEADEARAPSSPEDEGGEDAPEEGG
ELTEEQIQELQQLQQEQGGGGMPPAVEPADPEDVELELPDEEGQMLQLGPAEIEGEDVSS
AEASLDEFQTAWMVNVSFRGDGRDAWAQLTGEAAAYDPGDPRRRVAIVLDNQVISSPQVN
PDVEEGVGITGGSTSITGNFDQESAEDLAVLIEGGALPLPVEQIEQRTVGPTLGADAIDA
SWKAALVGLALTIIYICFAYRLVGFLASIALACYTLIAYGALVVLGATLTLPGLAGFVLA
IGMAIDANVLIFERAREEYQREKQVYDSNKSAGMQDATEEEAEAGEQPGRSRRRRRAIPP
NLQRSFVNGTKHAWSAIIDTNITTILAAILLIFLASGPVQGFGWTLTIGTIASMVSALII
ARVLTEWAIRRKVVKRHPDITGISQFSRVRTWLVERNPNLMGRGGLWLSIAGVIAAVAIA
GIAIMPKNFGVEFTGGRIMDFSVSEEIDVDEARTIVADAGYPQAVVQESGEGDIAVRTGP
LDNAEAQEIEDALATEGGDVDRVSDEMIGPSLGDQLRNQALLALGIALAVQMAYLAWRFR
WSFGLATMLALGFDVVLVIGLFTFLGAPLDGVFLAAMLSVIGFSVNDSVVVFDRIRDEWA
KDDKRSFKDIANSAILHTLPRTVNTTIGAVFILSVLAVFGGESLTNFAVAMLVGLIAGVF
STVFIAAPLAAWLQRWDRTAAPHVIKERQSKRRKEMERTRDEDDGAIV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
ttgtccacttcatccggggcgggggggcgcgttctccgcgcggtcttctccctgctcgtc
atgctcggcgccctcggcgccgcgctctacataccgccgcaactggggttggacctcagc
ggcggcacgcagatcgtgctggagacacacgactccgactcgggggtcgaggcgaacgcc
gagaacaccgagaaggcggtcgaggtcctccggcagcgcatcgactccctcggtgtcgcc
gagtccaccatcacgcggtccggcgagaaccggatcatcgtggagctgcccggggtccag
gacccgacggaagcggccgacatcctggggacgacggcgcaactgaccttccacccggtc
gtgggcgtggctgacccgggggcgcagcagcccgggatgcccggcgaggagctgggcgag
ggcctgccaccgcaggacgaggacgcccccgacgaggacgccggcgacgaggccgacgag
gcgcgtgccccctcctcccctgaggacgaaggcggcgaggacgccccggaggagggcggc
gagctcaccgaggagcagatccaggagctccagcaactgcagcaggagcagggcggaggc
ggaatgcctcccgcggtcgaaccggccgaccccgaggacgtcgaactcgaactgcccgac
gaagaggggcagatgctgcagctcggcccggcggagatcgagggcgaggacgtcagcagc
gcggaggcgtccctggacgagttccagacggcctggatggtcaacgtgtccttccgtggt
gacggacgcgacgcgtgggcccagctcaccggtgaagccgcggcctacgacccgggcgac
ccgcggcgccgtgtcgccatcgtgctcgacaaccaggtcatctcctcaccccaggtcaac
ccggacgtcgaggaaggtgtcggtatcaccgggggatccacctccatcaccggcaacttc
gaccaggagagcgcggaggacctcgcggtactgatcgagggtggcgcgctgccgctcccg
gtcgagcagatcgagcagcggaccgtcggcccgacactcggcgcggacgcgatcgacgcg
agctggaaggccgctctggtcggcctcgcgttgaccatcatctacatctgcttcgcctac
cgactggtcggcttcctcgcctcgatcgcgctggcgtgctacaccctgatcgcctacggc
gccctggtggtgctcggcgcgacgctcacactgcccggcctcgccggtttcgtgctggcg
atcggtatggcgatcgacgccaacgtgctcatcttcgaacgagcgcgagaggaataccag
cgcgagaaacaggtctacgactccaacaagtcggccggcatgcaggacgccacagaggaa
gaggccgaggccggagaacagccaggccgctcccgccgacgccgtcgcgcgatcccgccc
aacctgcagcgttccttcgtgaacggaacgaagcacgcgtggagcgcgatcatcgacacc
aacatcaccaccatcctcgccgccatcctgttgatcttcctggcgtcggggccggtgcag
ggcttcggttggacgctgaccatcggcaccatcgcctccatggtctccgctctgatcatc
gcccgggtgctgaccgagtgggcgattcgtcgcaaggtggtcaagcgtcacccggacatc
accggaatctcgcagttcagcagggtgcgcacctggctcgtggagcgcaaccccaacctg
atggggcgcggtggtctctggctgagcatcgccggtgtgatcgccgccgtcgcgatcgcc
ggtatcgcgatcatgccgaagaacttcggtgtggagttcaccggcgggcgcatcatggac
ttctccgtgtcggaggagatcgacgtcgacgaggcccgcaccatcgtggccgacgcggga
tacccgcaggcggtcgtccaggagtccggtgagggcgacatcgccgtgcgcaccggcccg
ctggacaacgccgaagctcaggagattgaggacgcgctggccaccgagggtggtgacgtg
gatcgggtctccgacgagatgatcggcccgagcctgggtgaccagctacggaaccaggcg
ctgctcgccctgggcatcgcgctcgcggtccagatggcctacctcgcctggcggttccgc
tggtcgttcggtctcgccactatgctggcgctgggcttcgacgtcgtgctggtgatcggc
ctgttcaccttcctcggcgcgccgctcgacggggtgttcctggccgcgatgctgagtgtc
atcggcttctcggtcaacgactccgtcgtggtcttcgaccggatcagggacgagtgggcg
aaggacgacaagcgatcgttcaaggacatcgcgaactccgcgatcctgcacaccctgccc
cggacggtgaacaccaccatcggcgcggtgttcatcctgtcggtcctcgccgtcttcggt
ggggagtcgctcaccaacttcgcggtggcgatgctggtcggcctgatcgccggtgtgttc
tcgaccgtgttcatcgcggcgcccctggcggcgtggttgcagcggtgggaccgcacggcc
gcgccacacgtcatcaaggaacgccagtccaagcgccggaaggagatggagcgcacgcgc
gacgaggacgacggcgcgatcgtctag
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